Program & Speakers
The workshop will take place from November 29th to December 1st. The lectures will take place at the Wallenberg Centre, located at Medicinareberget, above the Sahlgrenska Hospital in Gothenburg. The hands-on sessions will take place in the Centre for Cellular Imaging, Core Facilities, at Medicinareberget.
November 29th
| Time | Event |
|---|---|
| 8:00-8:45 |
|
| 8:45-9:00 | Welcome from the Head of the Centre for Cellular Imaging, Julia Fernandez-Rodriguez |
Session 1 |
Introduction to Array Tomography |
| 9:00-9:30 |
Jemima Burden, Head of Electron Microscopy, MRC Laboratory for Molecular and Cell Biology, University College London, United Kingdom Title TBA |
| 9:30-10:00 |
Erin Cocks, Scientific Officer in Volume Electron Microscopy at the Centre for Cellular Imaging, University of Gothenburg, Sweden Title: Correlative Array Tomography at the Centre for Cellular Imaging |
| 10:00-10:30 | Group discussions |
| 10:30-11:00 |
|
Session 2 |
Cellular 3D Volume - Array Tomography |
| 11:00-11:30 |
Irene Wacker, Cryo EM, AG Schröder & BioQuant, Universität Heidelberg, Germany Title: TBA |
| 11:30-12:00 |
Luke Noon, Principal Investigator, Center for Investigation Principe Felipe (CIPF), Valencia, Spain Title: Connecting hepatic nerves: taking 3D-connectomics to the PNS using correlative volume electron microscopy |
| 12:00-12:30 | Group Discussions |
| 12:30-13:30 |
|
Session 3 |
Large 3D Volumes - Array tomography |
| 13:30-14:00 |
Jacob Hoogenboom, Associate professor, Department of Imaging Physics, Integrated Light and Electron Microscopy, Delft University of Technology, Netherlands Title: Faster SEM for large-scale imaging |
| 14:00-14:30 |
Richard Schalek, Research Scientist Associate at Harvard University, United States Title: Realizing the benefits and opportunities of generating large-scale volume EM datasets by solving some inherent workflow challenges |
| 14:30-14:50 |
DELMIC, Marit de Beer, Company Presentation Title: FAST-EM – Obtain powerful insights from your biological samples through ultrafast nano imaging. |
Session 4 |
Correlative Array Tomography |
| 14:50-15:30 |
|
| 15:30-16:00 |
Martina Schifferer, Associate Investigator Electron Microscopy Hub, DZNE - German Center for Neurodegenerative Diseases, Munich, Germany Title: Correlative ATUM approaches to study neurodegeneration |
| 16:00-16:20 |
THERMO FISHER, Sarah Neumann, Company Presentation Array tomography solutions |
| 16:20-16:40 |
LEICA, Jan de Weert, Company Presentation ARTOS 3D |
|
KEYNOTE 16:40-17:40 |
Kristina Micheva, Senior Research Scientist at Stanford University School of Medicine, California, United States. She is a neuroscientist at Stanford University and one of the main developers of Array Tomography technique. |
| 17:40-18:00 | Group discussions |
| 18:00 |
|
November 30th
| Time | Event |
|---|---|
Session 5 |
New frontiers – Array Tomography from sample preparation to image processing & analysis |
| 9:00-9:30 |
José Maria Mateos Melero, Project Manager, Center for Microscopy and Image Analysis, University of Zurich, Switzerland Title: From samples to Results in an Imaging Facility: Optimized Array Tomography Workflows for Users-Driven Project |
| 9:30-10:00 |
Norman Rzepka, Managing Director at Scalable Minds GmbH Title: Data analysis, management and sharing for large-scale volume EM with WEBKNOSSOS |
| 10:00-10:20 |
ZEISS, Alexandra Elli Title: Fast and precise sample preparation by Femtosecond Ablation Laser for targeted Volume EM |
| 10:20-11:00 |
|
| 11:00-11:30 | Thomas Templier, Research Specialist, Janelia Research Campus, United States |
| 11:30-11:50 |
RMC Boeckeler, Gareth Morgan |
|
KEYNOTE 11:50-12:50 |
Moritz Helmstaedter, Max Planck Institute for Brain Research, Germany Title: Measuring communication maps of neuronal circuits, connectomes |
| 12:50 | Closing remarks |
| 13:00 | Grab and go lunch |
Workshops:
-
RMC Boeckeler, Gareth Morgan - Sample preparation: Automated Tape Collecting Ultra Microtome
-
LEICA, Jan de Weert - Sample preparation: ARTOS 3D Array Tomography Solution Get Quality Serial Sections
-
CARL ZEISS, Ralph Neujahr - High Resolution TEM-like imaging with your SEM: Serial Sections and Array Tomography
-
THERMO FISHER, Sarah Neumann - Talos L120C demo in the Array Tomography
-
Richard Schalek, Harvard University - Array Tomography processing and analysis: Neuroglancer and VAST, to explore and mine publically shared EM datasets
-
DELMIC, Marit de Beer - FAST-EM – Obtain powerful insights from your biological samples through ultrafast nano imaging
November 30th
| Time | Event | ||||
|---|---|---|---|---|---|
| 13:30-15:00 |
RMC Boeckeler Gareth Morgan LEICA Jan de Weert |
CARL ZEISS Ralph Neujahr |
THERMO FISHER Sarah Neumann |
Harvard University Richard Schalek |
DELMIC Marit de Beer |
| 15:00-15:30 |
|
|
|
|
|
| 15:30-17:00 |
RMC Boeckeler Gareth Morgan LEICA Jan de Weert |
CARL ZEISS Ralph Neujahr |
THERMO FISHER Sarah Neumann |
Harvard University Richard Schalek |
DELMIC Marit de Beer |
December 1st
| Time | Event | ||||
|---|---|---|---|---|---|
| 9:00-10:30 |
RMC Boeckeler Gareth Morgan LEICA Jan de Weert |
CARL ZEISS Ralph Neujahr |
THERMO FISHER Sarah Neumann |
Harvard University Richard Schalek |
DELMIC Marit de Beer |
| 10:30-11:00 |
|
||||
| 11:00-12:30 |
RMC Boeckeler Gareth Morgan LEICA Jan de Weert |
CARL ZEISS Ralph Neujahr |
THERMO FISHER Sarah Neumann |
Harvard University Richard Schalek |
DELMIC Marit de Beer |
| 12:30-13:30 |
|
||||
| 13:30-14:30 |
RMC Boeckeler Gareth Morgan LEICA Jan de Weert |
CARL ZEISS Ralph Neujahr |
THERMO FISHER Sarah Neumann |
Harvard University Richard Schalek |
DELMIC Marit de Beer |
| 14:30-15:00 |
Group discussion |
