University of Gothenburg
Medusas floating in the ocean.

Thematic Issues

Special issue "Marine evolutionary biology" in Evolutionary Applications is edited by members of CeMEB steering committe. "We wanted to show that the field of marine evolutionary biology, which was considered just a special case of general evolutionary biology until 10-15 years ago, has matured and is now an important, developing, field of its own.", says Pierre De Wit from the commtte.

Theme issue "Genomic architecture of supergenes: causes and evolutionary consequences" contains a total of fifteen articles. Among the authors are CeMEB members Emma Berdan, Roger Butlin, Anja Westram, Kerstin Johannesson, and Rui Faria. The Issue is compiled and edited by Emma L. Berdan, Thomas Flatt, Genevieve M. Kozak, Katie E. Lotterhos and Ben Wielstra.

The Theme Issue "Species' ranges in the face of changing environments", initiated at the CeMEB webinar last year, is now published in Philosophical Transactions of the Royal Society B. The two volumes are guest edited by Marina Rafajlovic, Roger Butlin, Jake Alexander and Kerstin Johannesson, and several CeMEB members have contributed with articles.

Scientific publications

Andersson, L., André, C., Johannesson, K., & Pettersson, M. (2023). Ecological adaptation in cod and herring and possible consequences of future climate change in the Baltic Sea. Frontiers in Marine Science

Behbehani, M., Uddin, S., Dupont, S., Fowler, S. W., Gorgun, A. U., Al-Enezi, Y., ... & Faizuddin, M. (2023). Ocean Acidification-Mediated Food Chain Transfer of Polonium between Primary Producers and Consumers. Toxics, 11(1), 14. 

Belivermiş, M., Kılıç, Ö., Gezginci-Oktayoglu, S., Sezer, N., Demiralp, S., Şahin, B., & Dupont, S. (2023). Physiological and gene expression responses of the mussel Mytilus galloprovincialis to low pH and low dissolved oxygen. Marine Pollution Bulletin, 187, 114602.

Berdan, E.L., Roger, F., Wellenreuther, M., Kinnby, A., Cervin, G., Pereyra, R., Töpel, M., Johannesson, K., Butlin, R.K., André, C. (2023). A metabarcoding analysis of the wrackbed microbiome indicates a phylogeographic break along the North Sea–Baltic Sea transition zoneEnvironmental Microbiology.

Billman, M., Isaac R. Santos, I.R. & Jahnke, M. (2023). Small carbon stocks in sediments of Baltic Sea eelgrass meadowsFrontiers in Marine Science.

Briddon, C. L., Nicoară, M., Hegedüs, A., Niculea, A., Bellerby, R., Eikrem, W., Crespo, B.G., Dupont, S. & Drugă, B. (2023). Acclimation to various temperature and pCO2 levels does not impact the competitive ability of two strains of Skeletonema marinoi in natural communities. Frontiers in Marine Science.

Chen, X.H., Yang, M.K., Li, Y.Y., Xie, Z.X., Zhang, S.F., Töpel, M., Amin, S.A., Lin, L., Ge, F. & Wang, D.Z. (2023). Improving the genome and proteome annotations of the marine model diatom Thalassiosira pseudonana using a proteogenomics strategy.  Marine Life Science & Technology volume 5, pages 102–115.

Cheregi, O., Pinder, M. I., Shaikh, K. M., Andersson, M. X., Engelbrektsson, J., Strömberg, N., Ekendahl, S., Kourtchenko, O., Godhe, A., Töpel, M. & Spetea, C. (2023). Transcriptome analysis reveals insights into adaptive responses of two marine microalgae species to Nordic seasons. Algal Research.

Clements, J.C., Sundin, J., Clark, T.D. & Jutfelt, F. (2023). Extreme original data yield extreme decline effects.  PLoS Biol 21(2): e3001996. 

Cornwallis, C. K., Svensson-Coelho, M., Lindh, M., Li, Q., Stábile, F., Hansson, L. A., & Rengefors, K. (2023). Single-cell adaptations shape evolutionary transitions to multicellularity in green algaeNature Ecology & Evolution, 1-14.

Cossa, D., Cossa, M., Timba, I., Nhaca, J., Macia, A., & Infantes, E. (2023). Drones and machine-learning for monitoring dugong feeding grounds and gillnet fishing.  Marine Ecology Progress Series.

Dickey, J. W., Brennan, R. S., Chung, S. S. W., Jeschke, J. M., Steffen, G. T., & Briski, E. (2023).  More than we bargained for: Zebra mussels transported amongst European native freshwater snailsNeoBiota83, 1-10. 

Elhasi, T. &  Blomberg, A. (2023). Caffeine activates HOG-signalling and inhibits pseudohyphal growth in Saccharomyces cerevisiae. BMC Research Notes 16:52. 

Ern, R., Andreassen, A. H., & Jutfelt, F. (2023). Physiological mechanisms of acute upper thermal tolerance in fishPhysiology

Forde, S., von der Heyden, S., Le Moan, A., Nielsen, E. S., Durholtz, D., Kainge, P., Kathena, J. N., Lipinski, M. R., Ndjaula, H. O. N., Matthee, C. A., & Henriques, R. (2023). Management and conservation implications of cryptic population substructure for two commercially exploited fishes (Merluccius spp.) in southern AfricaMolecular Ecology Resources.

Gagnon, K., Bocoum, E. H., Chen, C. Y., Baden, S. P., Moksnes, P. O., & Infantes, E. (2023). Rapid faunal colonisation and recovery of biodiversity and functional diversity following eelgrass restorationRestoration Ecology, e13887. 

Gollnisch, R., Wallenius, J., Gribble, K. E., Ahrén, D., & Rengefors, K. (2023). SAG-RAD: a method for single-cell population genomics of unicellular eukaryotesMolecular Biology and Evolution, msad095.

Gómez-Martínez, D., Bengtson, J., Nilsson, A. K., Clarke, A. K., Nilsson, R. H., Kristiansson, E., & Corcoll, N. (2023). Phenotypic and transcriptomic acclimation of the green microalga Raphidocelis subcapitata to high environmental levels of the herbicide diflufenicanScience of The Total Environment, 162604.

Helmerson, C., Weist, P., Brieuc, M. S. O., Maurstad, M. F., Schade, F. M., Dierking, J., Petereit, C., Knutsen, H., Metcalfe, J., Righton, D. and André, C., Krumme, U., Jentoft, S. & Hanel, R. (2023). Evidence of hybridization between genetically distinct Baltic cod stocks during peak population abundance (s). Evolutionary Applications.

Henriksson, S., Pereyra, R.T., Sodeland, M., Ortega-Martinez, O., Knutsen, H., Wennhage, H., &  André, C. (2023). Mixed origin of juvenile Atlantic cod (Gadus morhua) along the Swedish west coast. ICES Journal of Marine Science, 2023, 80, 145–157. 

Jansson, E., André, C., Quintela, M., Halvorsen, K.T., Besnier, F., Ayllon, F., Faust, E., Knutsen, H., Strand, Å. & Glover, K.A. (2023). Genetic study reveals local differentiation persisting in the face of high connectivity and a genomic inversion likely linked with sexual antagonism in a common marine fishICES Journal of Marine Science, p.fsad042. 

Johannesson, K., & Eriksson, O. (2023). The role of ecology in speciation: Dolph Schluter Crafoord Laureate 2023Ambio, 1-3. 

Kourtchenko, O., Lohbeck, K. T., Andersson, B., & Rajala, T. (2023). Diatom Growth: How to Improve the Analysis of Noisy Data. The Mathematical Biology of Diatoms, 141-164.

Li A., Zhao M., Zhang Z., Wang C., Zhang K., Zhang X., De Wit P., Wang W., Gao J., Guo X., Zhang G., Li L. (2023). Genome architecture and selective signals compensatorily shape plastic response to a new environment. The Innovation.

Lifjeld, J. T., de Gabriel Hernando, M., Fuertes Marcos, B., Grønstøl, G., Anmarkrud, J. A., Matschiner, M., & Leder, E. H. (2023). Rapid sperm length divergence in a polygynandrous passerine: a mechanism of cryptic speciation? Evolution.

Lucek, K., Giménez, M.D., Joron, M., Rafajlović, M., Searle, J.B., Walden, N., Westram, A.M., Faria, R. (2023). The Impact of Chromosomal Rearrangements in Speciation: From Micro- to Macroevolution. Cold Spring Harbor Perspectives in Biology .

Martaeng, R., Obst, M., & Kuklinski, P. (2023). Phylogeographic study using autonomous reef monitoring structures indicates fast range expansion of the invasive bryozoan Juxtacribrilina mutabilis. Hydrobiologia, 1-12.

Meriggi, C., Mehrshad, M., Johnson, R.K., Laugen, A.T., Drakare SChallenges in supplying empirical proof for predictions derived from Species Distribution Models (SDMs): the case of an invasive cyanobacteriumISME Communications.

Mittermayer F., Helmerson C., Duvetorp M., Johannesson K. & Panova M. (2023). The molecular background of the aspartate aminotransferase polymorphism in Littorina snails maintained by strong selection on small spatial scales. Gene.

Morin, F., Panova, M. A. Z., Schweizer, M., Wiechmann, M., Eliassen, N., Sundberg, P., ... & Polovodova Asteman, I. (2023). Hidden aliens: Application of digital PCR to track an exotic foraminifer across the Skagerrak (North Sea) correlates well with traditional morphospecies analysis. Environmental Microbiology.

Mukherjee, V., Lenitz, I., Lind, U., Blomberg, A. & Nygård, Y. (2023). CRISPRi screen highlights chromatin regulation to be involved in formic acid tolerance in Saccharomyces cerevisiae. 

Ord, J., Gossmann, T. I., & Adrian-Kalchhauser, I. (2023). High nucleotide diversity accompanies differential DNA methylation in naturally diverging populations. High Nucleotide Diversity Accompanies Differential DNA Methylation in Naturally Diverging PopulationsMolecular Biology and Evolution. 

Pereyra T.R., Rafajlović M., De Wit P., Pinder M., Kinnby A., Töpel M. & Johannesson K. (2023). Clones on the run: The genomics of a recently expanded partially clonal species. Molecular Ecology.

Pärssinen, V. & Kvarnemo, C. (2023). Female mating status has been overlooked in mate choice research: a comment on Richardson and Zuk. Behavioral Ecology 34: 184-184. 

Rieder, J., Kapopoulou, A., Bank, C., & Adrian-Kalchhauser, I. (2023). Metagenomics and metabarcoding experimental choices and their impact on microbial community characterization in freshwater recirculating aquaculture systemsEnvironmental microbiome18(1), 1-21. 

Riemsdijk, I., Arntzen, J. W., Bucciarelli, G. M., McCartney-Melstad, E., Rafajlović, M., Scott, P.A., Toffelmier, E., Shaffer, H. B., & Wielstra, B. (2023). Two transects reveal remarkable variation in gene flow on opposite ends of a European toad hybrid zone. Heredity

Rühmkorff, S., Wolf, F., Vajedsamiei, J., Barboza, F.R., Hiebenthal, C. & Pansch, C. (2023) Marine heatwaves and upwelling shape stress responses in a keystone predator. Proceedings of the Royal Society B.

Solbreck, C., Cassel-Lundhagen, A.,  Laugen, A.T. & Kaňuch, P. (2023). Post-glacial colonization of the Fennoscandian coast by a plant parasitic insect with an unusual life historyEcology and Evolution. 13:e9996. 

Steinhagen S., Hoffmann S., Pavia H. & Toth G.B. (2023). Molecular identification of the ubiquitous green algae Ulva reveals high biodiversity, crypticity, and invasive species in the Atlantic-Baltic Sea regionAlgal Research.

Svensson, O., & Kvarnemo, C. (2023). How sexual and natural selection interact and shape the evolution of nests and nesting behaviour in fishes. Philosophical Transactions of the Royal Society B.

Weerathunga, V., Hung, C. C., Dupont, S., Hsieh, H. H., Piyawardhana, N., Yuan, F. L., ... & Huang, W. J. (2023). Ocean acidification increases inorganic carbon over organic carbon in shrimp's exoskeleton. Marine Pollution Bulletin.

Xie, Z., Li, Y., Xiong, K., Tu, Z., Waiho, K., Yang, C., Deng, Y., Li, S., Fang, J.K., Hu, M., Dupont, S. & Wang, Y. (2023). Combined effect of salinity and hypoxia on digestive enzymes and intestinal microbiota in the oyster Crassostrea hongkongensis. Environmental Pollution.

Xie, Z., Shi, J., Shi, Y., Tu, Z., Hu, M., Yang, C., Deng, Y., Dupont, S., Xu, Z. & Wang, Y. (2023). Physiological responses to salinity change and diel-cycling hypoxia in gills of Hong Kong oyster Crassostrea hongkongensisAquaculture, p.739443. 

Yu, L., Khachaturyan, M., Matschiner, M., Healey, A., Bauer, D., Cameron, B., ... Jahnke, M., … & Reusch, T. B. (2023). Ocean current patterns drive the worldwide colonization of eelgrass (Zostera marina). nature plants.

Andersson B, Rengefors K, Kourtchenko O, Johannesson K, Berglund O, Filipsson HL. (2022) Cross-contamination risks in sediment-based resurrection studies of phytoplankton. Limnology and Oceanography Letters, doi:10.1002/lol2.10291

Atmore LM, Martínez-García L, Makowiecki D, André C, Lõugas L, Barrett JH, Star B. (2022) Population dynamics of Baltic herring since the Viking Age revealed by ancient DNA and genomics. Proceedings of the National Academy of Sciences (PNAS), doi:10.1073/pnas.2208703119

Berdan E. (2022) Demographic effects may affect adaptation to islandsPeer Community in Evolutionary Biology, 100153. doi:10.24072/pci.evolbiol.100153

Berdan EL, Blanckaert A, Butlin RK, Flatt T, Slotte T, Wielstra B. (2022) Mutation accumulation opposes polymorphism:supergenes and the curious case of balanced lethals. Philosophical Transactions of the Royal Society B. B377: 20210199. doi:10.1098/rstb.2021.0199

Berdan EL, Flatt T, Kozak GM, Lotterhos KE, Wielstra B. (2022) Genomic architecture of supergenes: connecting form and function. Philosophical Transactions of the Royal Society B.  B377:20210192. doi:10.1098/rstb.2021.0192

Blom EL, Wilson JR, Kvarnemo C, Amorim MCP, Svensson O. (2022) Male acoustic display in the sand goby – Essential cue in female choice, but unaffected by supplemental feedingJournal of Experimental Marine Biology and Ecology, doi:10.1016/j.jembe.2022.151791

Bolnick, D. I., Hund, A. K., Nosil, P., Peng, F., Ravinet, M., Stankowski, S., ... & Yukilevich, R. (2022). A multivariate view of the speciation continuum. Evolution. 

Bommarito C, Wahl M, Thieltges DW, Pansch C, Zucchetta M, Pranovi F. (2022) Biotic and abiotic drivers affect parasite richness, prevalence and abundance in Mytilus galloprovincialis along the Northern Adriatic SeaParasitology 1-9, doi:10.1017/S0031182021001438

Bosso L, Smeraldo S, Russo D, Chiusano ML, Bertorelle G, Johannesson K, Butlin RK, Danovaro R, Raffini F. (2022) The rise and fall of an alien: why the successful colonizer Littorina saxatilis failed to invade the Mediterranean SeaBiological Invasions, doi: 10.1007/s10530-022-02838-y

Brennan RS, deMayo JA, Dam HG, Finiguerra M, Baumann H, Vince Buffalo V, Pespenia MH. (2022) Experimental evolution reveals the synergistic genomic mechanisms of adaptation to ocean warming and acidification in a marine copepod. PNAS 119 (38) e2201521119, doi:10.1073/pnas.2201521119

De Jode A, Le Moan A, Johannesson K, Faria R, Stankowski S, Westram A, Butlin R, Rafajlović M, Fraïsse C. (2022) Ten years of demographic modelling of divergence and speciation in the sea. Evolutionary Applications, doi:10.1111/eva.13428

De Wit, P., Faust, E., Green, L., Jahnke, M., Pereyra, R. T., & Rafajlović, M. (2022). A decade of progress in marine evolutionary biology. Evolutionary Applications. 

Didier A,…[De Jode A,] al. (2022). Biodiversity, climate change, and adaptation in the Mediterranean. Ecosphere, 13(4), doi:10.1002/ecs2.3915

Duffy JE,…[Jahnke M,]…Olsen JL. (2022). A Pleistocene legacy structures variation in modern seagrass ecosystems. Proceedings of the National Academy of Sciences (PNAS), doi: 10.1073/pnas.2121425119

Durland E, Wit, PD, Langdon C. (2022). Genetic changes in larval oysters are more abundant and dynamic than can be explained by rare events or error: a response to Hedgecock (2022). Proceedings of the Royal Society B, 289(1976), doi:10.1098/rspb.2022.0197

Elphick M, Dupont S. (2022). Obituary: Michael C. Thorndyke (1946–2022)Journal of the Marine Biological Association of the United Kingdom, 1-3. doi:10.1017/S0025315422000704

Eriksson M, Kinnby A, De Wit P, Rafajlović M. (2022) Adaptive, maladaptive, neutral, or absent plasticity: Hidden caveats of reaction norms. Evolutionary Applications, doi:10.1111/eva.13482

Eriksson M, Rafajlović M. (2022) The role of phenotypic plasticity in the establishment of range margins. Philosophical Transactions Royal Society B 377: 20210012. doi:10.1098/rstb.2021.0012. One contribution of 11 to a theme issue ‘Species’ ranges in the face of changing environments (part I)'.

Gerhard M, … [Pansch C],… et al. (2022), Environmental variability in aquatic ecosystems: Avenues for future multifactorial experiments. Limnology and Oceanography Letters. doi:0.1002/lol2.10286  

Green L, Faust E, Hinchcliffe J, Brijs J, Holmes A, Englund Örn F, Svensson O, Roques JAC, Leder EH, Sandblom E, Kvarnemo C. (2022). Invader at the edge - genomic origins and physiological differences of round gobies across a steep urban salinity gradient. Evolutionary Applications, doi:10.1111/eva.13437

Gutiérrez-Valencia J,…[Berdan EL],…et al. (2022). Genomic analyses of the Linum distyly supergene reveal convergent evolution at the molecular levelCurrent Biology, doi:10.1016/j.cub.2022.08.042

Hassan, S., Haleemath Sameer, S., Töpel, M., & Aronsson, H. (2022). MSALigMap—A Tool for Mapping Active-Site Amino Acids in PDB Structures onto Known and Novel Unannotated Homologous Sequences with Similar Function. Life, 12(12), 2082.

Hattich, G. S., Listmann, L., Havenhand, J., Reusch, T. B., & Matthiessen, B. (2022). Temporal variation in ecological and evolutionary contributions to phytoplankton functional shifts. Limnology and Oceanography. 

Hearn KE, Koch EL, Stankowski S, Butlin RK, Faria R, Johannesson K, Westram AM. (2022), Differing associations between sex determination and sex-linked inversions in two ecotypes of Littorina saxatilis. Evolution Letters. doi:10.1002/evl3.295

Henriksson S, Pereyra RT, Sodeland M, Ortega-Martinez O, Knutsen H, Wennhage H, André C. (2022) Mixed origin of juvenile Atlantic cod (Gadus morhua) along the Swedish west coastbioRxiv, doi:10.1101/2022.06.03.494672

Hyndes GA, Berdan E, Duarte C, Dugan JE, Emery KA, Hambäck PA, Henderson CJ, Hubbard DM, Lastra M, Mateo MA, Olds A, Schlacher TA. (2022) The role of inputs of marine wrack and carrion in sandy-beach ecosystems: a global review. Biological Reviews, doi:10.1111/brv.12886

Jahnke M, Jonsson PR. (2022) Biophysical models of dispersal contribute to seascape genetic analyses. Philosophical Transactions Royal Society B 377: 20210024.  doi:10.1098/rstb.2021.0024. One contribution of 11 to a theme issue ‘Species’ ranges in the face of changing environments (part I)'.

Jahnke M, Moknes PO, Le-Moan A, Martens GA, Jonsson PR. (2022) Seascape genomics identify adaptive barriers correlated to tidal amplitude in the shore crab Carcinus maenas. Molecular Ecology, doi:10.1111/mec.16371.

Johannesson K, Leder EH, André C, Dupont S, Eriksson SP, Harding K, Havenhand JN, Jahnke M, Jonsson PR, Kvarnemo C, Pavia H, Rafajlović M, Rödström EM, Thorndyke M, Blomberg A. (2022) Ten years of marine evolutionary biology - challenges and achievements of a multidisciplinary research initiative. Evolutionary applications. doi: 10.1111/eva.13389. First published: 26 April 2022.

Koch EL, Ravinet M, Westram AM, Johannesson K, Butlin RK. (2022). Genetic architecture of repeated phenotypic divergence in Littorina saxatilis ecotype evolution. Evolution. doi:10.1111/evo.14602

Knutsen H, Catarino D, Rogers L, Sodeland M, Mattingsdal M, Jahnke M, Hutchings JA, Mellerud I, Espeland SH, Johanneson K, Roth O, Hansen MM, Jentof, S, André C, Jorde PE. (2022). Combining population genomics with demographic analyses highlights habitat patchiness and larval dispersal as determinants of connectivity in coastal fish speciesMolecular Ecology, 00, 1– 16. doi:10.1111/mec.16415

Kvarnemo C, Green L, Svensson O, Lindström K, Schöld S, Griful-Dones M, Havenhand JN, Leder EH. (2022). Molecular, behavioural and morphological comparisons of sperm adaptations in a fish with alternative reproductive tactics. Evolutionary Applications, doi:10.1111/eva.13438

Le Moan A, Panova M, De Jode A, Ortega-Martinez O, Duvetorp M, Faria R, Butlin R, Johannesson K. (2022) An allozyme polymorphism is associated with a large chromosomal inversion in the marine snail Littorina fabalis. Evolutionary Applications, doi:10.1111/eva.13427

Logg K, Andersson M, Blomberg A, Molin M. (2022). High-throughput growth measurements of yeast exposed to visible light. Bio-protocol 12(02): e4292. DOI: 10.21769/BioProtoc.4292.

Moyano, M., Illing, B., Akimova, A., Alter, K., Bartolino, V., Börner, G., … Mittermayer, F., … & Polte, P. (2022). Caught in the middle: Bottom-up and top-down processes impacting recruitment in a small pelagic fish. Reviews in Fish Biology and Fisheries, 1-30.

Nicol S, Lehodey P, Senina I, Bromhead D, Frommel A, Hampton J, Havenhand J, Margulies D, Munday P, Scholey V, Williamson J, Smith N. (2022) Ocean Futures for the World’s Largest Yellowfin Tuna Population Under the Combined Effects of Ocean Warming and Acidification. Frontiers in Marine Science. 9. 816772. 10.3389/fmars.2022.816772.

Noisette F,  Pansch C, Wall M, Wahl M, Hurd CL. (2022) Role of hydrodynamics in shaping chemical habitats and modulating the responses of coastal benthic systems to ocean global changeGlobal Change Biology 28:3812-3829, doi:10.1111/gcb.16165

Nour OM, Pansch C, Stumpp M. (2022) Freshening and warming may restrict dispersal of Hemigrapsus takanoi into the Baltic Proper due to interactive effects on larval survival and feedingMarine Biology 169, 125 (2022). doi:10.1007/s00227-022-04112-0

Ord J, Gossmann TI, Adrian-Kalchhauser I. (2022) High nucleotide diversity accompanies differential DNA methylation in naturally diverging populations. bioRxiv, doi:10.08.511291 

Pansch C, Raatz M, Comeau S, Hui TTY, Havenhand JN, Vajedsamiei J, Cornwall CE. (2022). Editorial: Influence of Environmental Variability on Climate Change Impacts in Marine Ecosystems. Frontiers in Marine Science – Global Change and the Future Ocean (DOI: 10.3389/fmars.2022.994756)

Panova MA, Varfolomeeva MA, Gafarova ER, Maltseva AL, Mikhailova NA, Granovitch AI. First insights into the gut microbiomes and the diet of the Littorina snail ecotypes, a recently emerged marine evolutionary model. Evolutionary Applications, doi:10.1111/eva.13447

Pereyra RT, Rafajlović M, De Wit P, Pinder M, Kinnby A, Töpel M, Johannesson K. (2022) Clones on the run - the genomics of a recently expanded facultative asexual species. bioRxiv 2022.05.11.491277; doi: 10.1101/2022.05.11.491277

Perini S, Butlin R, Westram A, Johannesson K. (2022). Very short mountings are enough for sperm transfer in Littorina saxatilis. Journal of Molluscan Studies, 88(1), eyab049. doi:10.1093/mollus/eyab049

Pinseel E, Nakov T, Van den Berge K, Downey KM, Judy KJ, Kourtchenko O, Kremp A, Ruck EC, Sjöqvist C, Töpel M, Godhe A, Alverson AJ. (2022) Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline. The ISME Journal, 1-12. doi:10.1038/s41396-022-01230-x

Rafajlović M, Alexander JM, Butlin RK, Johannesson K. (2022) Preface. Species' ranges in the face of changing environments (Part I). Philosophical Transactions Royal Society B 377: 20210491. doi:10.1098/rstb.2021.0491. One contribution of 11 to a theme issue ‘Species’ ranges in the face of changing environments (part I)'.

Rafajlović M, Alexander JM, Butlin RK, Johannesson K. (2022) Introduction to the theme issue ‘Species' ranges in the face of changing environments’. Philosophical Transactions Royal Society B 377: 2021000220210002, doi:10.1098/rstb.2021.0002.

Reeve J, Li Q, Lindtke D, Yeaman S. (2022) Comparing genome scans among species of the stickleback order reveals three different patterns of genetic diversity. Ecology and Evolution, doi:10.1002/ece3.8502

Rieder J, Martin-Sanchez PM, Osman OA, Adrian-Kalchhauser I, Eiler A. (2022) Detecting aquatic pathogens with field-compatible dried qPCR assays. Journal of Microbiological Methods, doi:10.1016/j.mimet.2022.106594

Rettig, K., Hansen, A. S., Obst, M., Hering, D., & Feld, C. K. (2022). A bayesian network to inform the management of key species in Kosterhavet National Park under contrasting storylines of environmental change. Estuarine, Coastal and Shelf Science, 108158.

Ruocco M, Jahnke M, Silva J, Procaccini G, Dattolo E. (2022) 2b-RAD Genotyping of the Seagrass Cymodocea nodosa Along a Latitudinal Cline Identifies Candidate Genes for Environmental Adaptation. Frontiers in Genetics, 16 May 2022 | doi:10.3389/fgene.2022.866758

Sefbom J, Kremp A, Hansen PJ, Johannesson K, Godhe A, Rengefors K. (2022). Local adaptation through countergradient selection in Northern Populations of Skeletonema marinoi. Evolutionary Applications, doi:10.1111/eva.13436

Sodeland M, Jentoft S, Jorde PE, Mattingsdal M, Albretsen J, Kleiven AR, Synnes AEW, Espeland SH,  Olsen EM,  Andrè C, Stenseth NC, Knutsen H. (2022) Stabilizing selection on Atlantic cod supergenes through a millennium of extensive exploitationProceedings of the National Academy of Sciences, Feb 2022, 119 (8) e2114904119; DOI:10.1073/pnas.2114904119

Stankowski S, Zagrodzka ZB, Galindo J, Montaño-Rendón M, Faria R, Mikhailova N, Blakeslee AMH, Arnason E, Broquet T, Morales HE, Grahame JW, Westram AM, Johannesson K, Butlin RK. (2022) Whole-genome phylogeography of the intertidal snail Littorina saxatilis. Authorea. December 05, 2022. doi:10.22541/au.167024888.84660705/v1

Steinhagen, S., Kramár, L., & Toth, G. B. (2022). The unheeded existence of the tubular greens: molecular analyses reveal the distribution of a new Ulva species (Ulvophyceae, Chlorophyta), Ulva capillata sp. nov. in the Atlantic-Baltic Sea transect. Journal of Applied Phycology, 1-14

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Johansson ON, Töpel M, Pinder MIM, Kourtchenko O, Blomberg A, Godhe A, Clarke AK. Skeletonema marinoi as a new genetic model for marine chain-forming diatomsScientific Reports volume 9, Article number: 5391 (2019) doi:10.1038/s41598-019-41085-5

Kinnby A, Pereyra RT, Havenhand JN, De Wit P, Jonsson PR, Pavia H, Johannesson K. Factors affecting formation of adventitious branches in the seaweeds Fucus vesiculosus and F. radicans. 2019, BMC Ecology 19(1)
DOI: 10.1186/s12898-019-0239-7

Kolora R, Tech M, Weigert A, Saffari A, Kehr S, Costa M, Spröer C, Indrischek H, Chintalapati M, Doose G, Bunk B, Overmann J, Lohse K, Bleidorn C, Henle K, Nowick K, Faria R, Stadler P, Schlegel M. Divergent evolution in the genomes of closely­ related lacertids, Lacerta viridis and L. bilineata and implications for speciationGigaScience,

Kotta J, Vanhatalo J, Jänes H, Orav-Kotta H, Rugiu L, Jormalainen V, Bobsien I, Viitasalo M, Virtanen E, Nystrom Sandman A, Isaeus M, Leidenberger S, Jonsson P, Johannesson K. 2019. Integrating experimental and distribution data to predict future species patternsScientific Reports. doi: 10.1038/s41598-018-38416-3

Marin B, Bouma TJ, Infantes E. (2019) Role of eelgrass on bed-load transport and sediment resuspension under oscillatory flowLimnology and Oceanography. DOI: 10.1002/LNO.11312

Mattingsdal M, Jorde PE, Knutsen H, Jentoft S, Stenseth NC, Sodeland M, Robalo JI, Hansen MM, André C, Blanco Gonzalez E. 2019. Demographic history, not adaptation, has shaped the strongly differentiated corkwing wrasse populations in Northern EuropeMolecular Ecology. doi:0.1111/mec.15310

Meysick L, Infantes E, Boström C. (2019) The influence of hydrodynamics and ecosystem engineers on eelgrass seed trappingPLoS ONE 14(9): e0222020

Morales H, Faria R, Johannesson K, Larsson T, Panova M, Westram AM, Butlin RK. 2019. Genomic architecture of parallel ecological divergence: beyond a single environmental contrastScience Advances, Vol. 5, no. 12, eaav9963, doi: 10.1126/sciadv.aav9963 

Pajusalu L, Dupont S, Lainela S, Martin G. Ocean acidification research in Estonia – Challenges and opportunitiesProceedings of the Estonian Academy of Sciences. 2019, 68, 1, 22–31. doi:10.3176/proc.2019.1.05

Pansch C, Claas Hiebenthal C. A new mesocosm system to study the effects of environmental variability on marine species and communities. Limnology and Oceanography: Methods, 2019, doi: 10.1002/lom3.10306

Pinder MIM, Johansson ON, Almstedt A, Kourtchenko O, Clarke AK, Godhe A, Töpel M. (2019) Genome Sequence of Kordia sp. Strain SMS9 Identified in a Non-Axenic Culture of the Diatom Skeletonema marinoiJournal of Genomics 7:46. doi:10.7150/jgen.35061

Sætre GP, Ravinet M. Evolutionary Genetics, Concepts, Analysis, and Practice. Oxford University Press, 2019, ISBN: 9780198830924

Stumpp M, Dupont S, Hu MY. (2018) Chapter 16: Measurement of feeding rates, respiration and pH regulatory processes in the light of ocean acidification research. In Methods in Cell Biology - Echinoderms Part A., 2019 (150), pp 391-409. doi:10.1016/bs.mcb.2018.11.017

Sundell K, Wrange A-L, Jonsson, PR, Blomberg A. 2019. Osmoregulation in barnacles: An evolutionary perspective of potential mechanisms and future research directionsFrontiers in Physiology.

Svedäng H, Barth JMI, Svenson A, Jonsson P, Jentoft S, Knutsen H, André CLocal cod (Gadus morhua) revealed by egg surveys and population genetic analysis after longstanding depletion on the Swedish Skagerrak coastICES Journal of Marine Science (2019) 76(2), 418-429,

Turner LM, Havenhand JN, Alsterberg C, Turner AD, Girisha SK, Rai A, Venugopal MN, Karunasagar I, Godhe A. Toxic Algae Silence Physiological Responses to Multiple Climate Drivers in a Tropical Marine Food ChainFrontiers in Physiology, 04 April 2019, doi:10.3389/fphys.2019.00373

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Clarke AK, Godhe A. Complete Genome Sequence of Novel Sulfitobacter pseudonitzschiae Strain SMR1, Isolated from a Culture of the Marine Diatom Skeletonema marinoiJournal of Genomics 2019; 7:7-10. doi:10.7150/jgen.30559.

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK. (2019) Whole Genome Sequence of Marinobacter salarius Strain SMR5, Shown to Promote Growth in its Diatom HostJournal of Genomics 7:60-63. doi:10.7150/jgen.39039

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK. Genome Sequence of Arenibacter algicola Strain SMS7, Found in Association with the Marine Diatom Skeletonema marinoiMicrobiology Resource Announcments, Jan 2019, 8 (2) e01461-18; DOI: 10.1128/MRA.01461-18

van Riemsdijk I, Butlin RK, Wielstra B, Arntzen JW. 2019. Testing an hypothesis of hybrid zone movement for toads in France. Molecular Ecology, online early. doi:10.1111/mec.15005

Weist P, Schade FM, Damerau M, Barth JMI, Dierking J, André C, Petereit C, Reusch T, Jentoft S, Hanel R, Krumme U.(2019) Assessing SNP-markers to study population mixing and ecological adaptation in Baltic codPLoS ONE 14(6): e0218127.

Wellenreuther M, Mérot C, Berdan E, Bernatchez LGoing beyond SNPs: the role of structural genomic variants in adaptive evolution and species diversificationMolecular Ecology. First published: 04 March 2019, doi:10.1111/mec.15066

Wielstra B, McCartney-Melstad E Arntzen JW, Butlin RK, Shaffer HB. 2019. Phylogenomics of the adaptive radiation of Triturus newts supports gradual ecological niche expansion towards an incrementally aquatic lifestyleMolecular Phylogenetics and Evolution, online early. doi:10.1016/j.ympev.2018.12.032

Wulff A, Johannesson K. 2019. Bring the ocean to the classroom - Introducing experimental studies to teachers with fair or no science knowledge. In Exemplary Practices in Marine Science Education (eds. G Fauville, DL Payne, MM Marrero, A Lantz-Andersson, F Crouch.) Springer. 
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Adrian-Kalchhauser I, Walser JC, Schwaiger M, Burkhardt-Holm P. RNA sequencing of early round goby embryos reveals that maternal experiences can shape the maternal RNA contribution in a wild vertebrateBMC Evolutionary Biology, BMC series – open, inclusive and trusted 2018 18:34

Amato A, Sabatino V, Nylund GM, Bergkvist J, Basu S, Andersson MX, Sanges R, Godhe A, Kiørboe T, Selander E, Ferrante MI. Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom Skeletonema marinoi. The ISME Journal 2018doi:10.1038/s41396-018-0094-0

Arnberg M, Calosi P, Spicer J, Taban I, Bamber S, Westerlund S, Vingen S, Baussant T, Bechmann R & Dupont S. Effects of oil and global environmental drivers on two keystone marine invertebratesScientific Reports. (2018) 8: 17380. doi:10.1038/s41598-018-35623-w

Asnicar D, Ašmonaitė G, Birgersson L, Kvarnemo C, Svensson O, Sturve J. (2018). Sand goby—an ecologically relevant species for behavioural ecotoxicologyFishes 3: 13, doi:10.3390/fishes3010013.

Bausch AR, Gallego MA, Harianto J, Thibodeau P, Bednaršek N, Havenhand JN, Klinger TInfluence of bacteria on shell dissolution in dead gastropod larvae and adult Limacina helicina pteropods under ocean acidification conditionsMarine Biology (2018) 165: 40.

Bergin C, Wentrup C, Brewig N, Blazejak A, Erséus C, Giere O, Schmid M, De Wit P, Dubilier N.Acquisition of a novel sulfur-oxidizing symbiont in the gutless marine worm Inanidrilus exumaeApplied and Environmental Microbiology (2018) 84: e02267-17. doi:10.1128/AEM.02267-17

Blankers T, Vilaça ST, Waurick I, Gray DA, Hennig RM, Mazzoni CJ, Mayer F,  Berdan EL. (2018), Demography and selection shape transcriptomic divergence in field cricketsEvolution. Accepted Author Manuscript. doi:10.1111/evo.13435

Bouquet J-M, Troedsson C, Novac A, Reeve M, Lechtenbörger AK, Massart W, Skaar KS, Aasjord A, Dupont S, Thompson EM. (2018) Increased fitness of a key appendicularian zooplankton species under warmer, acidified seawater conditionsPLoS ONE 13(1): e0190625.

Boyd PW, Collins S, Dupont S, Fabricius K, Gattuso JP, Havenhand J, Hutchins DA, Riebesell U, Rintoul MS, Vichi M, Biswas H, Ciotti A, Gao K, Gehlen M, Hurd CL, Kurihara H, McGraw CM, Navarro J, Nilsson GE, Passow U, Pörtner HO.  Experimental strategies to assess the biological ramifications of multiple drivers of global ocean change – a reviewGlobal Change Biology, doi:10.1111/gcb.14102

Butlin RK, Smadja CM. 2018. Coupling, reinforcement and speciationAmerican Naturalist 191: 155-172.

Campanati C, Dupont S, Williams GA, Thiyagarajan V. Differential sensitivity of larvae to ocean acidification in two interacting mollusc speciesMarine Environmental Research. (2018) doi: 10.1016/j.marenvres.2018.08.005.

Dahl M, Infantes E, Clevesjö R, Linderholm HW, Björk M, Gullström M. Increased current flow enhances the risk of organic carbon loss from Zostera marina sediments: Insights from a flume experimentLimnology and Oceanography (2018) 63(6): 2793-2805. 

De Wit P, Durland E, Ventura A, Langdon CL. Gene expression correlated with delay in shell formation in larval Pacific oysters (Crassostrea gigas) exposed to experimental ocean acidification provides insights into shell formation mechanismsBMC Genomics 2018, 19:160

De Wit P, Yamada K, Panova M, André C, Johannesson K. Diet-dependent gene expression highlights the importance of Cytochrome P450 in detoxification of algal secondary metabolites in a marine isopodScientific Reports, volume 8, Article number: 16824 (2018)

Diopere E, Vandamme SG, Hablützel PI, Cariani A, Van Houdt J, Rijnsdorp A, Tinti F, FishPopTrace Consortium, Volckaert FAM, Maes GE, Handling editor: Hauser L. Seascape genetics of a flatfish reveals local selection under high levels of gene flowICES Journal of Marine Science, Volume 75, Issue 2, 1 March 2018, Pages 675–689,

Espinel-Velasco N, Hoffmann L, Agüera A, Byrne M, Dupont S, Uthicke S, Webster NS Lamare M. Effects of ocean acidification on the settlement and metamorphosis of marine invertebrate and fish larvae: a reviewMarine Ecology Progress Series. (2018) doi: 10.3354/meps12754.

Falkenberg LJ, Dupont S & Bellerby R. Approaches to re-consider literature on physiological effects of environmental change: examples from ocean acidification researchFrontiers in Marine Science, section Global Change and the Future Ocean. (2018) 5: 453. doi:10.3389/fmars.2018.00453

Faria R, Chaube P, Morales H, Larsson T, Lemmon AR, Lemmon EM, Rafajlovic M, Panova M, Ravinet M, Johannesson K, Westram AM, Butlin RK. Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypesMolecular Ecology, 2018, doi: 10.1111/mec.14972

Faria R, Triant D, Perdomo­-Sabogal A, Overduin B, Bleidorn C, Santana C, Langenberger D, Dall’Olio G, Indrischek H, Aerts J, et al. (2018) Introducing evolutionary biologists to the analysis of big data: guidelines to organize extended bioinformatics training coursesEvolution: Education and Outreach 11:8. doi:10.1186/s12052-018-0080-z

Faust E, Halvorsen KT, Andersen P, Knutsen H, André C. Cleaner fish escape salmon farms and hybridize with local wrasse populationsRoyal Society Open Science. 2018, 5: 171752.

García-Souto D, Alonso S, Costa D, Eirín-López JM, Rolán-Álvarez E, Faria R, Galindo J, Pasantes JJ.(2018) Karyotype characterization of nine periwinkle species (Gastropoda, Littorinidae)Genes 9, 517. doi: 10.3390/genes9110517

Gazda MA, Andrade P, Afonso S, Dilyte J, Archer JP, Lopes RJ, Faria R, Carneiro M. (2018) Signatures of Selection on Standing Genetic Variation Underlie Athletic and Navigational Performance in Racing PigeonsMolecular Biology and Evolution 35, 1176–1189. doi: 10.1093/molbev/msy030

Ghenu A-H, Blanckaert A, Butlin RK, Kulmuni J, Bank C. 2018. Conflict between heterozygote advantage and hybrid incompatibility in haplodiploids (and sex chromosomes). Molecular Ecology 26: 3093-3103.

Glaus KBJ, Adrian-Kalchhauser I, Piovano S, Appleyard SA, Brunnschweiler JM, Rico C. Fishing for profit or food? Socio-economic drivers and fishers’ attitudes towards sharks in FijiMarine Policy, Published online,

Harding KC, Salmon M, Teilmann J, Dietz D, Harkonen T. (2018). Population wide decline in somatic growth in harbour seals – early signs of density dependenceFrontiers in Ecology and Evolution.

Havenhand JN, Filipsson HL, Niiranen S, Troell M, Crépin AS, Jagers S, Langlet D, Matti S, Turner D, Winder M, de Wit P, Anderson LG. Ecological and functional consequences of coastal ocean acidification: Perspectives from the Baltic-Skagerrak SystemAmbio (2018).

Hollander J, Montano-Rendon M, Bianco G, Yang X, Westram AM, Duvaux L, Reid DG, Butlin RK. 2018. Are assortative mating and genital divergence driven by reinforcement? Evolution Letters,

Huang X. Jiang X, Sun M, Dupont S, Huang W, Hu M, Li Q & Wang Y.  Effects of copper on hemocyte parameters in the estuarine oyster Crassostrea rivularis under low pH conditionsAquatic Toxicology. (2018) 23: 61-68. doi:10.1016/j.aquatox.2018.08.003

Huang X, Liu Y, Liu Z, Zhao Z, Dupont S, Wu F, Huang W, Chen J, Hu M, Lu W, Wang Y. Impact of zinc oxide nanoparticles and ocean acidification on antioxidant responses of Mytilus coruscusChemosphere (2018) 196:182-195

Huang X, Liu Z, Xie Z, Dupont S, Huang Q, Wu F, Kong H, Liu L, Sui Y, Lin D, Lu W, Hu M & Wang YOxidative stress induced by titanium dioxide nanoparticles increases under seawater acidification in the thick shell mussel Mytilus coruscus. Marine Environmental Research. 2018 doi: 10.1016/j.marenvres.2018.02.029.

Infantes E, Moksnes PO. Eelgrass seed harvesting: Flowering shoots development and restoration on the Swedish west coastAquatic Botany (2018)144:9-19

Jagers S, Matti S, Crépin AS, Langlet D, Havenhand JN, Troell M, Filipsson HL, Galaz VR, Anderson LG.Societal causes of, and responses to, ocean acidificationAmbio

Jahnke M, D'Esposito D, Orrù L, Lamontanara A, Dattolo E, Badalamenti F, Mazzuca S, Procaccini G, Orsini L. Adaptive responses along a depth and a latitudinal gradient in the endemic seagrass Posidonia oceanica.
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Jahnke M, Jonsson PR, Moksnes P-O, Loo L-O, Jacobi MN, Olsen JL. Seascape genetics and biophysical connectivity modelling support conservation of the seagrass Zostera marina in the Skagerrak–Kattegat region of the eastern North Sea. Evolutionary Applications, 2018;00:1–17.

Johannesson K, Ring AK, Johannesson KB, Renborg E, Jonsson PR, Havenhand JN. Oceanographic barriers to gene flow promote genetic subdivision of the tunicate Ciona intestinalis in a North Sea archipelagoMarine Biology (2018) 165: 126.

Jonsson PR, Kotta J, Andersson HC, Herkül K, Virtanen E, Nyström Sandman A, Johannesson K. 2018. High climate velocity and population fragmentation may constrain climate-driven range shift of the key habitat former Fucus vesiculosusDiversity and Distributions. DOI: 10.1111/ddi.12733

Jonsson PR, Wrange AL, Lind U, Abramova A, Ogemark M, Blomberg A. The Barnacle Balanus improvisus as a Marine Model - Culturing and Gene ExpressionJournal of Visual Experiments (138), e57825, doi:10.3791/57825 (2018).

Kolora R, Tech M, Weigert A, Saffari A, Kehr S, Costa M, Spröer C, Indrischek H, Chintalapati M, Doose G, Bunk B, Overmann J, Lohse K, Bleidorn C, Henle K, Nowick K, Faria R, Stadler P, Schlegel M. Divergent evolution in the genomes of closely-related lacertids, Lacerta viridis and L. bilineata and implications for speciationGigaScience, doi:10.1093/gigascience/giy160

Kourtchenko O, Rajala T, Godhe A. Growth of a common planktonic diatom quantified using solid medium culturingScientific Reports, volume 8, Article number: 9757 (2018) 

Knutsen H, Jorde PE, Hutchings JA, Hemmer‐Hansen J, Grønkjær P, Jørgensen KEM, André C, Sodeland M, Albretsen J, Olsen EM. Stable coexistence of genetically divergent Atlantic cod ecotypes at multiple spatial scalesEvolutonary Applications, 2018. doi: 10.1111/eva.12640

Larsson J, Smolarz K, Świeżak J, Turower M, Czerniawska N, Grahn M. 2018. Multi biomarker analysis of pollution effect on resident populations of blue mussels from the Baltic SeaAquatic Toxicology. Epub ahead of print. [DOI 10.1016/j.aquatox.2018.02.024]

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Mattingsdal M, Jentoft S, Tørresen OK, Knutsen H, Hansen MM, Robalo JI, Zagrodzka Z, André C, Gonzalez EB. A continuous genome assembly of the corkwing wrasse (Symphodus melops)Genomics, 2018. 
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Marandel F, Lorance P, Andrello M, Charrier G, Le Cam S, Trenkel V M (2018) Insights from genetic and demographic connectivity for the management of rays and skatesCanadian Journal of Fisheries and Aquatic Sciences 75, 1291–1302. doi:10.1139/cjfas-2017-0291

Moksnes P-O, Eriander L, Infantes E, Holmer M. (2018) Local regime shifts prevent natural recovery and restoration of lost eelgrass beds along the Swedish west coastEstuaries and Coasts,

Morales HE, Pavlova A, Amos N, Major R, Kilian A, Greening C, Sunnucks P. Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climatesNature Ecology & Evolution, Volume 2, pages 1258–1267 (2018).| 

Mäkinen H, Sävilammi T, Papakostas S, Leder E, Vøllestad LA, Primmer CR. 2018. Modularity Facilitates Flexible Tuning of Plastic and Evolutionary Gene Expression Responses During Early DivergenceGenome Biology and Evolution, evx278,

Olofsson M, Kourtchenko O, Zetsche EM, Marchant HK, Whitehouse MJ, Godhe A, Ploug H. 2018. High single-cell diversity in carbon and nitrogen assimilations by a chain-forming diatom across a centuryEnvironmental Microbiology, 2018 Oct 2. doi: 10.1111/1462-2920.14434. [Epub ahead of print]

Pansch C, Scotti M, Barboza FR, et al. Heat waves and their significance for a temperate benthic community: A near‐natural experimental approachGlobal Change Biology 2018;00:1–11.

Pansch C, Hattich GSI, Heinrichs ME, Pansch A, Zagrodzka Z, Havenhand JN (2018) Long-term exposure to acidification disrupts reproduction in a marine invertebratePLoS ONE 13(2): e0192036.

Parker DJ, Wiberg RAW, Trivedi U, Tyukmaeva VI, Gharbi K, Butlin RK, Hoikkala A, Kankare M, Ritchie, MG. 2018. Inter- and intra-specific genomic divergence in Drosophila montana shows evidence for cold adaptationGenome Biology and Evolution 10: 2086–2101.

Pincheira-Donoso D, Tregenza T, Butlin RK, Hodgson DJ. 2018. Sexes and species as rival units of niche saturation during community assemblyGlobal Ecology & Biogeography 5: 593-603.

Pereda-Briones L, Infantes E, Orfila A, Tomas F, Terrados J. (2018) Dispersal of seagrass propagules: substratum and hydrodynamic effectsMarine Ecology Progress Series. 593: 47-59

Pertoldi C, Jensen LF, Alstrup AKO, Munk OL, Pedersen TB, Sonne C, Dietz R, Daugaard-Petersen T, Kortegaard HE, Tange-Olsen M, Harding KC, Hammer Jensen T. (2018). Prevalence of skull pathologies in European harbour seals (Phoca vitulina) during 1981-2014Mammal Research, 63: 55-63.

Prokkola JM, Nikinmaa M, Lewis M, Anttila K, Kanerva M, Ikkala K, Seppänen E, Kolari I, Leder EH. 2018. Cold temperature represses daily rhythms in the liver transcriptome of a stenothermal  teleost under decreasing day lengthJournal of Experimental Biology,  doi:10.1242/jeb.170670 

Rivas MJ, Saura M, Pérez-Figueroa A, Panova M, Johansson T, André C, Caballero A, Rolán-Alvarez E, Johannesson K, Quesada H. (2018). Population genomics of parallel evolution in gene expression and gene sequence during ecological adaptationScientific Reports, 8: 16147

Reusch TBH, …Johannesson K, …, et al. The Baltic Sea as a time machine for the future coastal oceanScience Advances  09 May 2018: Vol. 4, no. 5, eaar8195, DOI: 10.1126/sciadv.aar8195

Rudman SM, Barbour MA, Csilléry K, Gienapp P, Guillaume F, Hairston Jr NG, Hendry AP, Lasky JR, Rafajlović M, Räsänen K, Schmidt PS, Seehausen O, Therkildsen NO, Turcotte MM, Levine JM. What genomic data can reveal about eco-evolutionary dynamicsNature Ecology & Evolution, (2018)2, 9–15, doi:10.1038/s41559-017-0385-2

Sandström A, Lundmark C, Andersson K, Johannesson K, Laikre L. Understanding and bridging the conservation-genetics gap in marine conservationConservation Biology, 2018, Dec 22. doi: 10.1111/cobi.13272. [Epub ahead of print]

Saremi S, Isaksson M, Harding KC. 2018. Bio accumulation of radioactive Caesium in marine mammals in the Baltic Sea – reconstruction of a historical time seriesScience of The Total Environment, 631: 7-12.

Sefbom J, Kremp A, Rengefors K, Jonsson PR, Sjöqvist C, Godhe A. A planktonic diatom displays genetic structure over small spatial scalesEnvironmental Microbiology, 2018 Apr 3. doi: 10.1111/1462-2920.14117

Sundqvist L, Godhe A, Jonsson PR, Sefbom J. The anchoring effect-long-term dormancy and genetic population structureThe ISME Journal (2018) Aug 1. doi: 10.1038/s41396-018-0216-8. 

Świątek P, De Wit P, Jarosz N, Chajec Ł, Urbisz AZ.  Micromorphology of ovaries and oogenesis in Grania postclitellochaeta (Clitellata: Enchytraeidae). Zoology (2018) 126: 119-127. doi:10.1016/j.zool.2017.11.004

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK. 2018. Complete genome sequence of Loktanella vestfoldensis strain SMR4r, a novel strain isolated from a culture of the chain-forming diatom Skeletonema marinoiGenome Announcements 6:e01558-17

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK. Whole-Genome Sequence of the Novel Antarctobacter heliothermus Strain SMS3, Found in Association with the Marine Diatom Skeletonema marinoiJournal of Genomics 2018; 6:113-116. doi:10.7150/jgen.27637. 

Vestbo S, Obst M, Quevedo Fernandez FJ, Intanai I, Funch P. Present and Potential Future Distributions of Asian Horseshoe Crabs Determine Areas for ConservationFrontier Marine Science, 2018,

Westram AM, Rafajlovic M, Chaube P, Faria R, Larsson T, Panova M, Ravinet M, Blomberg A, Mehlig B, Johannesson K, Butlin R. Clines on the seashore: The genomic architecture underlying rapid divergence in the face of gene flowEvolution Letters, 2018,

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Adrian-Kalchhauser I, N'Guyen A, Hirsch PE, Burkhardt-Holm P. The invasive round goby may attach its eggs to ships or boats - but there is no evidenceAquatic Invasions (2017) Volume: 12 Issue: 2 Pages: 263-267

Adrian-Kalchhauser I, Svensson O, Kutschera VE, Alm Rosenblad M, Pippel M, Winkler S, Schloissnig S, Blomberg A, Burkhardt-Holm P. The mitochondrial genome sequences of the round goby and the sand goby reveal patterns of recent evolution in gobiid fishBMC Genomics (2017) 18:177 DOI 10.1186/s12864-017-3550-8

Bailey A, De Wit P, Thor P, Browman HI, Bjelland R, Shema S, Fields DM, Runge JA, Thompson C, Hop H.Regulation of gene expression is associated with tolerance of the Arctic copepod Calanus glacialis to CO2-acidified sea waterEcology and Evolution, 2017;00:1-16

Barth JMI, Berg PR, Jonsson PR, Bonanomi S, Corell H, Hemmer-Hansen J, Jakobsen KS, Johannesson K, Jorde PE, Knutsen H, Moksnes PO, Star B, Stenseth NC, Svedäng H, Jentoft S, André C. Genome architecture enables local adaptation of Atlantic cod despite high connectivityMolecular Ecology 2017;00:1–15.

Berdan EL, Finck J, Johnston PR, Waurick I, Mazzoni CJ, Mayer F. (2017) Transcriptome profiling of ontogeny in the acridid grasshopper Chorthippus biguttulusPLoS ONE 12(5): e0177367.

Beresford J, Elias M, Pluckrose L, Sundström L, Butlin RK, Pamilo P, Kulmuni J. 2017. Widespread hybridization within mound-building wood ants in Southern Finland results in cytonuclear mismatches and potential for sex-specific hybrid breakdownMolecular Ecology, 26: 4013-4026. doi 10.1111/mec.14183

Borcier E, Morvezen R, Boudry P, Miner P, Charrier G, Laroche J, Hegaret H. (2017) Effects of bioactive extracellular compounds and paralytic shellfish toxins produced by Alexandrium minutum on growth and behaviour of juvenile great scallops Pecten maximusAquatic Toxicology 184, 142-154. doi:10.1016/j.aquatox.2017.01.009

Butlin RK, Eyres I, Westram AM (Eds.) 2017. Evolutionary Genetics of Reproductive IsolationGenes 9 (Special Issue).

Butlin RK & Brookfield JFY. (Eds.) 2017. Genetic Variation, Selection and Evolution: Special Issue in Celebration of the 50th Anniversary of the Population Genetics Group MeetingHeredity 118 (1) (Special Issue).

Cheney KL, Cortesi F, Nilsson Sköld H. Regulation, constraints and benefits of colour plasticity in a mimicry systemBiological Journal of the Linnean Society, 2017, blx057

Dupont S. ((Editorial) I am the Ocean – arts and sciences to move from ocean literacy to passion for the oceanJournal of the Marine Biological Association of the United Kingdom, 2017, page 1-3, 2017. doi:10.1017/S0025315417000376

Dupont S, Fauville G. (2017) Ocean literacy as a key toward sustainable development and ocean governance. In Svensson L, Markandya A, Kumar P & Nunes P (eds) Handbook on the Economics and Management for Sustainable Oceans. Edward Elgar Publishers & UNEP. pp. 519-537.

Ellegaard M, Godhe A, Ribeiro S. Time capsules in natural sediment archives—Tracking phytoplankton population genetic diversity and adaptation over multidecadal timescales in the face of environmental changeEvolutionary Applications 2017;00:1–6.

Ellis RP, Davison W, Queirós AM, Kroeker KJ, Calosi P, Dupont S, Spicer JI, Wilson RW, Widdicombe S, Urbina MA. Does sex really matter? Explaining intraspecies variation in ocean acidification responsesBiology Letters 2017 13 20160761; doi: 10.1098/rsbl.2016.0761.

Erséus C, Envall I, De Wit P, Gustavsson LM. Molecular data reveal a tropical freshwater origin of Naidinae (Annelida, Clitellata, Naididae)Molecular Phylogenetics and Evolution 2017, Volume 115, October 2017, Pages 115-127.

Faust E, André C, Meurling S, Kochmann J, Christiansen H, Fast Jensen L, Charrier G, Laugen AT, Strand Å. (2017) Origin and route of establishment of the invasive Pacific oyster Crassostrea gigas in ScandinaviaMarine Ecology Progress Series 575:95-105. 

Gaitán-Espitia JD, Marshall D, Dupont S, Bacigalupe LD, Bodrossy L, Hobday AJ. Geographical gradients in selection can reveal genetic constraints for evolutionary responses to ocean acidificationBiology Letters, 2017 13 20160784; DOI: 10.1098/rsbl.2016.0784.

Godhe A, Rynearson T. The role of intraspecific variation in the ecological and evolutionary success of diatoms in changing environmentsPhilosophical transactions of the Royal Society B. Gross S, Kourtchenko O, Rajala T, Andersson B, Fernandez L, Blomberg A, Godhe A. (2017). Optimization of a high-throughput phenotyping method for chain-forming phytoplankton speciesLimnolology and Oceanography Methods. doi:10.1002/lom3.10226

Haenel Q, Holovachov O, Jondelius U, Sundberg P, Bourlat SJ. NGS-based biodiversity and community structure analysis of meiofaunal eukaryotes in shell sand from Hållö island, Smögen, and soft mud from Gullmarn Fjord, SwedenBiodiversity Data Journal 5: e12731 (08 Jun 2017)

Harlos C, Edgell TC, Hollander J. No evidence of publication bias in climate change scienceClimatic Change(2017) 140: 375. doi:10.1007/s10584-016-1880-1

Hopkins DP, Cameron DD, Butlin RK. 2017. The chemical signatures underlying host plant discrimination by aphidsScientific Reports 7: 8498. doi:10.1038/s41598-017-07729-0

Hu M, Tseng Y-C, Su Y-H, Lein E, Lee H-G, Lee J-R, Dupont S, Stumpp M. 2017 Variability in larval gut pH regulation defines sensitivity to ocean acidification in six species of the Ambulacraria superphylumProceedings of the Royal Society B 284: 20171066.

Jansson E, Quintela M, Dahle G, Albretsen J, Knutsen H, André C, Strand Å, Mortensen S, Taggart JB, Karlsbakk E, Kvamme BO, Glover KA. Handling editor: Lorenz Hauser.
Genetic analysis of goldsinny wrasse reveals evolutionary insights into population connectivity and potential evidence of inadvertent translocation via aquaculture.
ICES Journal of Marine Science fsx046. doi:

Jakubavičiūtė E, Bergström U, Eklöf JS, Haenel Q, Bourlat SJ. (2017) DNA metabarcoding reveals diverse diet of the three-spined stickleback in a coastal ecosystemPLoS ONE, 12(10): e0186929.

Johannesson K. A life-cycle approach to species barriersMolecular Ecology, 2017;26:3321–3323.

Johannesson K, Butlin RK. (2017) What explains rare and conspicuous colours in a snail? A test of time-series data against models of drift, migration or selectionHeredity, 118:21–30. doi:10.1038/hdy.2016.77

Johannesson K, Butlin RK, Panova M, Westram AM. (2017). Mechanisms of adaptive divergence and speciation in Littorina saxatilis: Integrating knowledge from ecology and genetics with new data emerging from genomic studies. In: Oleksiak MF, Rajora OP (eds.), Population Genomics: Marine Organisms. Springer, New York.

Johansson D, Pereyra RT, Rafajlovic M, Johannesson K. Reciprocal transplants support a plasticity-first scenario during colonisation of a large hyposaline basin by a marine macro algaBMC Ecology (2017) 17:14, doi: 10.1186/s12898-017-0124-1

Kauhala K, Bäcklin BM, Raitaniemi J, Harding KC. 2017. The effect of prey quality and ice conditions on the nutritional status of Baltic grey seals of different age groupsMammal Research 62:351-362.

Kolora SR, Faria R, Weigert A, Nowick K, Schaffer S, Grimm A, Henle K, Sahyon A, Stadler P, Bleidorn C, Schlegel M. (2015). The complete mitochondrial genome of Lacerta bilineata and comparison with its closely related congener L. viridisMitochondrial DNA 28, 1¬3.

Larsson J, Lind EE, Corell H, Grahn, M, Smolarz K, Lönn M. 2017 Regional genetic differentiation in the Blue mussel from the Baltic Sea areaEstuarine, Coastal and Shelf Science 195: 98-109. [DOI 10.1016/j.ecss.2016.06.016 ]

Le Pennec G, Butlin RK, Jonsson PR, Larsson AI, Lindborg J, Bergström E, Westram AM, Johannesson K.(2017) Adaptation to dislodgement risk on wave-swept rocky shores in the snail Littorina saxatilisPLoS ONE12(10): e0186901.

Lehnert K, Weirup L, Harding KC, Härkönen T, Karlsson O, Teilmann J. Antarctic seals: Molecular biomarkers as indicators for pollutant exposure, health effects and diet.
Science of The Total Environment, 2017 Volumes 599–600, 1 December 2017, Pages 1693-1704

Lind U, Järvå M, Alm Rosenblad M, Pingitore P, Karlsson E, Wrange AL, Kamdal E, Sundell K, André C, Jonsson PR, Havenhand J, Eriksson LA, Hedfalk K, Blomberg A. (2017) Analysis of aquaporins from the euryhaline barnacle Balanus improvisus reveals differential expression in response to changes in salinityPLoS ONE 12(7): e0181192.

Lundholm N, Ribeiro S, Godhe A, Rostgaard Nielsen L, Ellegaard M. Exploring the impact of multidecadal environmental changes on the population genetic structure of a marine primary producerEcology and Evolution. 2017;00:1–11.

Marques JP, Sotelo G, Larsson T, Johannesson K, Panova M, Faria R (2017) Comparative mitogenomic analysis of three species of periwinkles: Littorina fabalisL. obtusata and L. saxatilisMarine Genomics, 32:41-47.

Olsson KH, Johansson S, Blom E-L, Lindström K, Svensson O, Nilsson Sköld H, Kvarnemo C. (2017) Dark eyes in female sand gobies indicate readiness to spawnPLoS ONE 12(6): e0177714.

Osborn D, Dupont S, Hansson L & Metian M. (2017) Ocean acidification – impacts and governance. In Svensson L, Markandya A, Kumar P & Nunes P (eds) Handbook on the Economics and Management for Sustainable Oceans. Edward Elgar Publishers & UNEP. pp 396-415.

Panova M, Nygren A, Jonsson PR, Leidenberger S (2017). A molecular phylogeny of the northeast Atlantic species of the genus Idotea (Isopoda) with focus on the Baltic SeaZoologica Scripta, 46:188-199.

Pansch C, Jonsson PR, Berglin M, Pinori E, Wrange AL.
A new flow-through bioassay for testing low-emission antifouling coatingsBiofouling 2017.

Pédron N, Artigaud S, Zambonino Infante JL, Le Bayon N, Charrier G,  Pichereau V, Laroche J. Proteomic responses of European flounder to temperature and hypoxia as interacting stressors: Differential sensitivities of populationsScience of The Total Environment. Volume 586, 2017, Pages 890–899

Pédron N, Le Du J, Charrier G, Zambonino-Infante J-L, Le Bayon N, Vasconcelos RP, Fonseca VF, Le Grand F, Laroche J (2017) Contrasting patterns of energy metabolism in northern vs southern peripheral European flounder populations exposed to temperature rising and hypoxiaMarine Environmental Research, 129, 258-267. doi:10.1016/j.marenvres.2017.06.010

Porcelli D, Gaston KJ, Butlin RK, Snook RR. 2017. Local adaptation of reproductive performance during thermal stressJournal of Evolutionary Biology, 30: 422-429. 

Pritchard VL, HM Viitaniemi, RJS McCairns, J Merilä, M Nikinmaa, CR Primmer, and EH Leder. 2017. Regulatory Architecture of Gene Expression Variation in the Threespine Stickleback, Gasterosteus aculeatusG3: Genes, Genomes, Genetics, 7:165-178.

Rafajlović M, Kleinhans D, Gulliksson C, Fries J, Johansson D, Ardehed A, Sundqvist L, Pereyra RT, Mehlig B, Jonsson PR, Johannesson K. (2017) Neutral processes forming large clones during colonization of new areasJournal of Evolutionary Biology. 2017, 30: 1544-1560. doi:10.1111/jeb.13124

Ravinet, M., Faria, R., Butlin, R. K., Galindo, J., Bierne, N., Rafajlović, M., Noor, M. A. F., Mehlig, B. and Westram, A. M. Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flowJournal of Evolutionary Biology. 2017, 30: 1450–1477. doi:10.1111/jeb.13047

Runcie DE, Dorey N, Garfield DA, Stumpp M, Dupont S, Wray GA. Genomic characterization of the evolutionary potential of the sea urchin Strongylocentrotus droebachiensis facing ocean acidificationGenome Biology and Evolution (2017) doi: 10.1093/gbe/evw272

Star B, Boessenkool S, Gondek AT, Nikulina EA, Hufthammer AK, Pampoulie C, Knutsen H, André C, Nistelberger HM, Dierking J, Petereit C, Heinrich D, Jakobsen KS, Stenseth NC, Jentoft S, Barrett JHAncient DNA reveals the Arctic origin of Viking Age cod from Haithabu, GermanyPNAS 2017 : 1710186114v1-201710186.

Sui Y, Liu Y, Zhao X, Dupont S, Hu M, Wu F, Huang X, Li J, Lu W, Wang Y. Defense Responses to Short-term Hypoxia and Seawater Acidification in the Thick Shell Mussel Mytilus coruscusFrontiers in Physiology, 2017, 8: Article 145. doi: 10.3389/fphys.2017.00145

Svensson O, Gräns J, Celander MC, Havenhand J, Leder EH, Lindström K, Schöld S, van Oosterhout C, Kvarnemo C. (2017) Immigrant reproductive dysfunction facilitates ecological speciationEvolution. doi:10.1111/evo.13323

Svensson O, Woodhouse K, Smith A, van Oosterhout C, Turner GF, Seehausen O. The genetics of mate preferences in hybrids between two young and sympatric Lake Victoria cichlid speciesProceedings of the Royal Society B, 2017, 284: 20162332.

Thor P, Bailey A, Dupont S, Calosi P, Søreide JE, De Wit P, Guscelli E, Loubet-Sartrou L, Deichmann IM, Candee MM, Svensen C, King AL, Bellerby RGJ. Contrasting physiological responses to future ocean acidification among Arctic copepod populationsGlobal Change Biology. doi:10.1111/gcb.13870

Turner LM, Bhatta R, Eriander L, Gipperth L, Johannesson K, Kadfak A, Karunasagar I, Knutsson P, Laas K, Moksnes P-O, Godhe A. 2017. Transporting ideas between marine and social sciences: experiences from interdisciplinary research programsElementa Science of the Anthrpocene, 5:14 doi:

Töpel M, Zizka A, Calio MF, Scharn R, Silvestro D, Antonelli A. SpeciesGeoCoder: Fast Categorization of Species Occurrences for Analyses of Biodiversity, Biogeography, Ecology, and EvolutionSystematic Biology,Volume 66, Issue 2, 1 March 2017, Pages 145–151,

Uusi‐Heikkilä, S, T Sävilammi, E Leder, R Arlinghaus, and CR Primmer. 2017. Rapid, broad‐scale gene expression evolution in experimentally harvested fish populationsMolecular Ecology, 26:3954–3967.

Vargas CA, Lagos NA, Lardies MA, Duarte C, Manríquez PH, Aguilera VM, Broitman B, Widdicombe S, Dupont S. Species-specific responses to ocean acidification should account for local adaptation and adaptive plasticityNature Ecology & Evolution, 1, 0084 (2017).
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Westgaard J-I, Staby A, Aanestad Godiksen J, Geffen A J, Svensson A, Charrier G, Svedäng H, André C.(2017) Large and fine scale population structure in European hake (Merluccius merluccius) in the Northeast AtlanticICES Journal of Marine Science 74, 1300-1310. doi:10.1093/icesjms/fsw249

Wielstra B, Burke T, Butlin RK, Arntzen JW. 2017. A signature of dynamic biogeography: enclaves indicate past species replacementProceedings of the Royal Society, B, 284: 20172014.

Wielstra B, Burke T, Butlin RK, Avcı A, Űzűm N, Bozkurt E, Olgun K, Arntzen JW. 2017. A genomic footprint of hybrid zone movement in crested newtsEvolution Letters, 1: 93-101. doi:10.1002/evl3.9.

Wu F, Wang T, Cui S, Xie Z, Dupont S, Zeng J, Gu H, Kong H, Hu M, Lu W, Wang Y. Effects of seawater pH and temperature on foraging behavior of the Japanese stone crab Charybdis japonicaMarine Pollution Bulletin, 2017, Available online 5 May 2017.


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Adrian-Kalchhauser I, Burkhardt-Holm P. (2016) An eDNA Assay to Monitor a Globally Invasive Fish Species from Flowing FreshwaterPLoS ONE 11(1): e0147558. doi:10.1371/journal.pone.0147558

André C, Svedäng H, Knutsen H, Dahle G, Jonsson P, Ring AK, Sköld M, Jorde PE.
Population structure in Atlantic cod in the eastern North Sea-Skagerrak-Kattegat: early life stage dispersal and adult migrationBMC Research Notes 2016, 9:63  doi:10.1186/s13104-016-1878-9

Antonelli A, Hettling H, Condamine FL, Vos K, Nielsson RH, Sanderson J, Sauquet H, Schaarn R, Silvestro D, Töpel M, Bacon CD, Oxelman B, Vos RA. Towards a Self-Updating Platform for Estimating Rates of Speciation and Migration, Ages, and Relationships of TaxaSystematic Biology (2016), doi:10.1093/sysbio/syw066
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Appelqvist C, Havenhand JNA phenological shift in the time of recruitment of the shipworm, Teredo navalis L., mirrors marine climate changeEcology and Evolution 

Ardehed A, Johansson D, Sundqvist L, Schagerström E, Zagrodzka Z, Kovaltchouk NA, Bergström L, Kautsky L, Rafajlovic M, Pereyra RT, Johannesson K. (2016) Divergence within and among Seaweed Siblings (Fucus vesiculosus and F. radicans) in the Baltic SeaPLoS ONE 11(8): e0161266. doi:10.1371/journal.pone.0161266

Blom EL, Mück I, Heubel K, Svensson O. Acoustic and visual courtship traits in two sympatric marine Gobiidae species – Pomatoschistus microps and Pomatoschistus minutusEnvironmental Biology of Fishes (2016). doi:10.1007/s10641-016-0550-5

Borcier E, Charrier G, Amérand A., Théron, M., Loizeau V., Pédron, N., Laroche J. (2016) Bioenergetic transcriptomic responses of European flounder (Platichthys flesus) populations in contrasted environments: impacts of pollution and global warmingJournal of Xenobiotics 6:6586, 28-32. doi:10.4081/xeno.2016.6586

Bourlat SJ (Ed). Marine Genomics - Methods and Protocols. ISBN: 978-1-4939-3772-1 (Print) 978-1-4939-3774-5 (Online) Methods in Molecular Biology, Volume 1452, 2016

Bourlat SJ , Haenel Q, Finnman J, Leray M. Preparation of Amplicon Libraries for Metabarcoding of Marine Eukaryotes Using Illumina MiSeq: The Dual-PCR MethodMarine Genomics, 2016. Volume 1452 of the series Methods in Molecular Biology pp 197-207

Bunse C, Bertos-Fortis M, Sassenhagen I, Sildever S, Sjöqvist C, Godhe A, Gross S, Kremp A, Lips I, Lundholm N, Rengefors K, Sefbom J, Pinhassi J, Legrand C.  Spatio-Temporal Interdependence of Bacteria and Phytoplankton during a Baltic Sea Spring BloomFrontiers in Microbiology (2016) 7:517. doi: 10.3389/fmicb.2016.00517

Calosi P, De Wit P, Thor P, Dupont S. Will life find a way? Evolution of marine species under global changeEvolutionary Applications, (2016) 9: 1035–1042. doi:10.1111/eva.12418

Caplat P, Edelaar P, Dudaniec RY, Green AJ, Okamura B, Cote J, Johan Ekroos J, Jonsson PR, Löndahl J, Tesson SVM, Petit EJ. Looking beyond the mountain: dispersal barriers in a changing worldFrontiers in Ecology and the Environment 2016; 14(5): 261–268, doi:10.1002/fee.1280

Carey N, Dupont S, Sigwart JD. Sea Hare Aplysia punctata (Mollusca: Gastropoda) Can Maintain Shell Calcification under Extreme Ocean AcidificationThe Biological Bulletin 2016 231:2, 142-151

Carvalho J, Sotelo G, Galindo J, Faria R. (2016). Genetic characterization of flat periwinkles (Littorinidae) from the Iberian Peninsula reveals interspecific hybridization and different degrees of differentiationBiological Journal of the Linnean Society 118, 503-¬519.

Chan KYK, Grünbaum D, Arnberg M, Dupont S. Impacts of ocean acidification on survival, growth, and swimming
behaviours differ between larval urchins and brittlestars
ICES Journal of Marine Science, 2016, doi: 10.1093/icesjms/fsv073.

Day JG, Tytor S, Egardt J, Applegren M, Rad-Menéndez C, Chepurnova O, Vyverman W, Godhe A. Challenges for the Maintenance and Cryopreservation of Multiple Isolates of Model Microorganisms: An Example Using the Marine Diatom Skeletonema marinoiBiopreservation and Biobanking. 2016 Nov 29. 

De Wit P.  SNP Discovery Using Next Generation Transcriptomic Sequencing. Marine Genomics, 2016. Volume 1452 of the series Methods in Molecular Biology pp 81-95.

De Wit P, Dupont S, Thor P. Selection on oxidative phosphorylation and ribosomal structure as a multigenerational response to ocean acidification in the common copepod Pseudocalanus acuspes. Evolutionary Applications, (2016) 9: 1112–1123. 

Dylus DV, Czarkwiani A, Stångberg J, Ortega-Martinez O, Dupont S, Oliveri P. Large-scale gene expression study in the ophiuroid Amphiura filiformis provides insights into evolution of gene regulatory networksEvoDevo2016 7:2,
doi: 10.1186/s13227-015-0039-x

Eriander L, Wrange AL, Havenhand JN. Simulated diurnal pH fluctuations radically increase variance in—
but not the mean of—growth in the barnacle Balanus improvisus
ICES Journal of Marine Science (2016), 

Fernandez-Ricaud L, Kourtchenko O, Zackrisson M, Warringer J, Blomberg A.
PRECOG: a tool for automated extraction and visualization of fitness components in microbial growth phenomicsBMC Bioinformatics. 2016 17:249

Franco-Belussi L, Nilsson Sköld H, de Oliveira C. Internal pigment cells respond to external UV radiation in frogsJournal of Experimental Biology (2016)  doi: 10.1242/jeb.134973

Frommel AY, Margulies D, Wexler JB, Stein MS, Scholey VP, Williamson JE, Bromhead D, Nicol S, Havenhand JNOcean acidification has lethal and sub-lethal effects on larval development of yellowfin tuna, Thunnus albacaresJournal of Experimental Marine Biology and Ecology,
Volume 482, 2016, Pages 18–24

Georgian SE, Dupont S, Kurman M, Butle, A, Strömberg  SM, Larsson AI, Cordes EE. (2016), Biogeographic variability in the physiological response of the cold-water coral Lophelia pertusa to ocean acidificationMarine Ecology

Godhe A, Sjöqvist C, Sildever S, Sefbom J, Harðardóttir S, Bertos-Fortis M, Bunse C, Gross S, Johansson E, Jonsson PR, Khandan S, Legrand C, Lips I, Lundholm N, Rengefors KE, Sassenhagen I, Suikkanen S, Sundqvist L, Kremp A. (2016). Physical barriers and environmental gradients cause spatial and temporal genetic differentiation of an extensive algal bloomJournal of Biogeography (2016) doi: 10.1111/jbi.12722

Hamilton PB, Cowx IG, Oleksiak MF, Griffiths AM, Grahn M, Stevens JR, Carvalho GR, Nicol E, Tyler CR.2016. Population‐level consequences for wild fish exposed to sublethal concentrations of chemicals–a critical reviewFish and Fisheries 17 (3): 545-566. [doi: 10.1111/faf.12125]

Hardisty AR,..[Bourlat S]…[Leidenberger S]…[Obst M]… BioVeL a virtual laboratory for data analysis and modelling in biodiversity science and ecologyBMC Ecology (2016) 16:49
doi: 10.1186/s12898-016-0103-y

Heuschele J, Nemming L, Tolstrup L, Kiørboe T, Nylund GM, Selander E. The sex specific metabolic footprint of Oithona davisaeJournal of Sea Research 117 (2016) 1–6

Hu MY, Michael K, Kreiss CM, Stumpp M, Dupont S, Tseng Y and Lucassen M. Temperature modulates the effects of ocean acidification on intestinal ion transport in Atlantic cod, Gadus morhuaFrontiers in Physiology (2016) 7:198. doi: 10.3389/fphys.2016.00198

Huyse T, Oeyen M, Larmuseau MH, Volckaert FA. Co-phylogeographic study of the flatworm Gyrodactylus gondae and its goby host Pomatoschistus minutusParasitology International, 2016 Dec 24;66(2):119-125. doi: 10.1016/j.parint.2016.12.008. 

Infantes E, Crouzy C, Moksnes P-O (2016) Seed Predation by the Shore Crab Carcinus maenas: A Positive Feedback Preventing Eelgrass Recovery? PLoS ONE 11(12): e0168128. doi:10.1371/journal.pone.0168128

Jackson B, Butlin R, Navarro A, Faria R. (2016) Chromosomal Rearrangements and Speciation. pp. 149¬158. In: Encyclopedia of Evolutionary Biology (Editors: R. Kliman & D. Ortiz¬Barrientos), Elsevier. (Book chapter)
ISBN: 9780128000496

Jager T, Ravagnan E, Dupont S. Near-future ocean acidification impacts maintenance costs in sea-urchin larvae: Identification of stress factors and tipping points using a DEB modelling approachJournal of Experimental Marine Biology and Ecology (2016) 474:11-17

Johannesson K, Saltin S H, Charrier G, Panova M, Ring A-K, Kvarnemo C, André C. (2016) Non-random paternity of offspring in a highly promiscuous marine snail suggests postcopulatory sexual selectionBehavioral Ecology and Sociobiology.70, 1357-1366. doi:10.1007/s00265-016-2143-x

Jonsson PR, Nilsson Jacobi M, Moksnes PO. How to select networks of marine protected areas for multiple 
species with different dispersal strategies
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Larsson J, Lönn M, Lind EE, Świeżak J, Smolarz K, Grahn M.  2016. Sewage treatment plant associated genetic differentiation in the blue mussel from the Baltic Sea and Swedish west coastPeerJ, 4, p.e2628. [DOI 10.7717/peerj.2628]

Leray  M, Haenel Q, Bourlat SJ. Preparation of Amplicon Libraries for Metabarcoding of Marine Eukaryotes Using Illumina MiSeq: The Adapter Ligation MethodMarine Genomics, 2016.
Volume 1452 of the series Methods in Molecular Biology pp 209-218

Liti G, Warringer J, Blomberg A. (2016) Budding Yeast Strains and Genotype-Phenotype mapping. Book chapter in CSHL protocol series “Budding Yeast: A Laboratory Manual
Eds. Fields, S, Andrew, B, Davis, T., and Boone, C. doi:10.1101/pdb.top077735

Michael K, Kreiss CM, Hu MY, Koschnick N, Bickmeyer U, Dupont S, Pörtner HO, Lucassen M. Adjustments of molecular key components of branchial ion and pH regulation in Atlantic cod (Gadus morhua) in response to ocean acidification and warmingComparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology (2016) doi:10.1016/j.cbpb.2015.12.006

Morvezen R, Boudry P, Laroche J, Charrier G. (2016) Stock enhancement or sea ranching? Insights from monitoring the genetic diversity, relatedness and effective population size in a seeded great scallop population (Pecten maximus)Heredity 117, 142-148. doi:10.1038/hdy.2016.42

Morvezen R, Charrier G, Boudry P, Chauvaud L, Breton F, Strand Ø, Laroche J. (2016) Genetic structure of a commercially exploited bivalve, the great scallop Pecten maximus, along the European coastsConservation Genetics 17, 57-67. doi:10.1007/s10592-015-0760-y

Nasrolahi A , Havenhand J, Wrange AL,  Pansch C.
Population and life-stage specific sensitivities to temperature and salinity stress in barnaclesScientific Reports 6, Article number: 32263 (2016)

Nilsson Sköld H, Aspengren S, Cheney KL, Wallin M. Fish Chromatophores - From Molecular Motors to Animal BehaviorInternational Review of Cell and Molecular Biology (2016) doi:10.1016/bs.ircmb.2015.09.005

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Panova M , Aronsson H, Cameron RA, Dahl P, Godhe A, Lind U, Ortega-Martinez O, Pereyra R, Tesson SVM, Wrange AL, Blomberg A, Johannesson K. DNA Extraction Protocols for Whole-Genome Sequencing in Marine Organisms.
Marine Genomics, 2016. Volume 1452 of the series Methods in Molecular Biology pp 13-44.

Pinho C, Faria R. (2016). Magadi tilapia ecological specialization: filling the early gap in the speciation continuum. Molecular Ecology 25, 1420¬-1422. (News and Views)

Prantoni, A. L., De Wit, P. and Erséus, C. (2016), First reports of Grania (Clitellata: Enchytraeidae) from Africa and South America: molecular phylogeny and descriptions of nine new speciesZoological Journal of the Linnean Society, 176: 485–510. doi: 10.1111/zoj.12333

Rafajlović M, Emanuelsson A, Johannesson K, Butlin RK, Mehlig B. A universal mechanism generating clusters of differentiated loci during divergence-with-migrationEvolution 2016, doi: 10.1111/evo.12957

Ravinet M, Westram A, Johannesson K, Butlin R, André C, Panova MShared and non-shared genomic divergence in parallel ecotypes of Littorina saxatilis at a local scaleMolecular Ecology (2016) 25, 287-305, doi: 10.1111/mec.13332

Selander E, Heuschele J, Nylund GM, Pohnert G, Pavia H, Bjærke O, Pender-Healy LA, Tiselius P, Kiørboe T. (2016), Solid phase extraction and metabolic profiling of exudates from living copepodsPeerJ 4:e1529; DOI 10.7717/peerj.1529

Sildever S, Sefbom J, Lips I, Godhe A. (2016), Competitive advantage and higher fitness in native populations of genetically structured planktonic diatomsEnvironmental Microbiology. doi:10.1111/1462-2920.13372

Sui Y, Kong H, Huang X, Dupont S, Hu M, Storch D, Pörtner HO, Lu W, Youji Wang Y. Combined effects of short-term exposure to elevated CO2 and decreased O2 on the physiology and energy budget of the thick shell mussel Mytilus coruscusChemosphere 2016, 155:207-216. doi:10.1016/j.chemosphere.2016.04.054

Sunday JM,…[Dupont S], … et al. Ocean acidification can mediate biodiversity shifts by changing biogenic habitatNature Climate Change (2016) doi:10.1038/nclimate3161

Sundqvist L, Keenan K, Zackrisson M, Prodöhl P, Kleinhans D. (2016), Directional genetic differentiation and relative migrationEcology and Evolution. doi: 10.1002/ece3.2096

Svensson O, Smith A, García-Alonso J, van Oosterhout C. (2016) Hybridization generates a hopeful monster: a hermaphroditic selfing cichlidRoyal Society Open Science
doi: 10.1098/rsos.150684

Turner LM, Alsterberg C, Turner AD, Girisha SK, Rai A, Havenhand JN, Venugopal MN, Karunasagar I, Godhe A.
Pathogenic marine microbes influence the effects of climate change on a commercially important tropical bivalve.
Scientific Reports 6, Article number: 32413 (2016)

Ventura A, Schulz S, Dupont S. Maintained larval growth in mussel larvae exposed to acidified under-saturated seawater. 
Scientific Reports 6, Article number: 23728 (2016). doi:10.1038/srep23728

Vihtakari M, Havenhand J, Renaud PE, Hendriks IE. Variable Individual- and Population- Level Responses to Ocean AcidificationFrontiers in Marine Sciences, 29 April 2016 |

Westram AM, Johannesson K. (2016) Parallel Speciation. In: Kliman, R.M. (ed.), Encyclopedia of Evolutionary Biology. vol. 3, pp. 212–219. Oxford: Academic Press.

Westram AM, Panova M, Galindo J, Butlin RK. 2016. Targeted resequencing reveals geographical patterns of differentiation for loci implicated in parallel evolutionMolecular Ecology 25:3169-3186.

Wood HL, Sundell K, Almroth BC, Sköld HN, Eriksson SP. 2016 Population-dependent effects of ocean acidificationProceedings Royal Society B 283: 20160163.

Wolff FE, Eriksson A, Manica A, Mehlig B. How Levins’ dynamics emerges from a Ricker metapopulation model on the brink of extinctionTheoretical Ecology (2016) 9: 173.

Wrange A-LCharrier G, Thonig A, Alm Rosenblad MBlomberg AHavenhand JN, Jonsson PRAndré C. (2016) The Story of a Hitchhiker: Population Genetic Patterns in the Invasive Barnacle Balanus(Amphibalanus) improvisus Darwin 1854PLoS ONE 11(1): e0147082. doi:10.1371/journal.pone.0147082

Zackrisson M, Hallin J, Ottosson LG, Dahl P, Fernandez-Parada E, Ländström E, Fernandez-Ricaud L, Kaferle P, Skyman A, Stenberg S, Omholt S, Petrovič U, Warringer J, Blomberg A. Scan-o-matic: High-Resolution Microbial Phenomics at a Massive Scale.
G3:Genes, Genomes, Genetics 2016 Sep 8; 6:3003

Zimmerman J, Wentrup C, Sadowski M, Blazejak A, Gruber-Vodicka H, Ott J, Cronholm B, De Wit P, Erséus C, Dubilier N. Closely coupled evolutionary history of ecto- and endosymbionts from two distantly-related animal phylaMolecular Ecology (2016) doi: 10.1111/mec.13554


Annenkova NV, Hansen G, Moestrup Ø, Rengefors K. Recent radiation in a marine and freshwater dinoflagellate species flock.  The ISME Journal, doi:10.1038/ismej.2014.267

Appelqvist C, Al-Hamdani ZK, Jonsson PR, Havenhand JN. Climate Envelope Modeling and Dispersal Simulations Show Little Risk of Range Extension of the Shipworm, Teredo navalis (L.), in the Baltic SeaPLoS ONE (2015) 10(3): e0119217. doi:10.1371/ journal.pone.0119217

Ardehed AJohansson D, Schagerström E, Kautsky L, Johannesson KPereyra RComplex spatial clonal structure in the macroalgae Fucus radicans with both sexual and asexual recruitmentEcology and Evolution(2015) doi:10.1002/ece3.1629

Aronson RB, Smith KE, Vos SC, McClintock JB, Amsler MO, Moksnes PO, Ellis DS, Kaeli J, Singh H, Bailey JW, Schiferl JC, van Woesik R, Martin MA, Steffel BV, Deal ME, Steven M. Lazarus SM, Havenhand JN, Swalethorp R, Kjellerup S, Thatjeg S. No barrier to emergence of bathyal king crabs on the Antarctic shelfProceedings of National Academy of Sciences of the United States of America (PNAS). 
doi: 10.1073/pnas.1513962112

Basse WC, Gutowska MA, Findeisen U, Stumpp M, Dupont S, Jackson DJ, Himmerkus N, Melzner F, Bleich M. A sea urchin Na+K+2Cl- cotransporter is involved in the maintenance of calcification-relevant cytoplasmic cords in Strongylocentrotus droebachiensis larvaeComparative Biochemistry and Physiology, Part A (2015), doi: 10.1016/j.cbpa.2015.05.005

Baumgartner FA, Pavia H, Toth GB (2015) Acquired phototrophy through retention of functional chloroplasts increases growth efficiency of the sea slug Elysia viridis. PLoS ONE 10(4): e0120874. doi:10.1371/journal.pone.0120874

Berg PR, Jentoft S, Star B, Ring KH, Knutsen H , Lien S, Jakobsen KS, André C. Adaptation to low salinity promotes genomic divergence in Atlantic cod (Gadus morhua L.),
Genome Biology and Evolution

Bjærke O, Jonsson PR, Alam A, Selander E. 2015. Chain length in phytoplankton is regulated to evade predationJournal of Plankton Research, doi: 10.1093/plankt/fbv076

Boero F, Dupont S, Thorndyke M. (2015) Make new friends, but keep the old: towards a transdisciplinary and balanced strategy to evaluate Good Environmental StatusJournal of the Marine Biological Association of the United Kingdom, available on CJO2015. doi:10.1017/S0025315415000557.

Braga Goncalves I, Ahnesjö I, Kvarnemo C. (2015). The evolutionary puzzle of egg size, oxygenation and parental care in aquatic environmentsProceedings of the Royal Society B. 282: 20150690. doi: 10.1098/rspb.2015.0690.

Braga Goncalves I, Ahnesjö I, Kvarnemo C. (2015). Embryo oxygenation in pipefish brood pouches: novel insightsJournal of Experimental Biology 218: 1639-1646. doi: 10.1242/ jeb.120907.

Breitburg DL, Salisbury J, Bernhard JM, Cai WJ, Dupont S, Doney SC, Kroeker KJ, Levin LA, Long WC, Milke LM, Miller SH, Phelan B, Passow U, Seibel BA, Todgham AE, Tarrant AM.   And on top of all that… Coping with ocean acidification in the midst of many stressorsOceanography 2015.28(2):48–61,

Bromhead D, Scholey V, Nicol S, Margulies D, Wexler J, Stein M, Hoyle S, Lennert-Cody C, Williamson J, Havenhand J, Ilyina T, Lehodey P. The potential impact of ocean acidification upon eggs and larvae of yellowfin tuna (Thunnus albacares)Deep-Sea Research II (2015),

Carvalho J, Pereira C, Sotelo G, Costa D, Galindo J, Faria R. (2015) De novo isolation of 17 microsatellite loci for flat periwinkles (Littorina fabalis and L. obtusata) and their application for species discrimination and hybridization studiesJournal of Molluscan Studies 21, 421-425.

Chan KYK, García E, Dupont S. Acidification reduced growth rate but not swimming speed of larval sea urchinsScientific reports, 5 : 9764, doi: 10.1038/srep09764

Cortesi F, et al. Phenotypic Plasticity Confers Multiple Fitness Benefits to a MimicCurrent Biology (2015), doi:10.1016/j.cub.2015.02.013

Delroisse J, Ortega-Martinez O, Dupont S, Mallefet J, Flammang P. De novo transcriptome of the European brittle star Amphiura filiformis pluteus larvaeMarine Genomics (2015)

De Wit P, Dupont S, Thor P. Selection on oxidative phosphorylation and ribosomal structure as a multigenerational response to ocean acidification in the common copepod Pseudocalanus acuspesEvolutionary applications. doi: 10.1111/eva.1233

De Wit P, Pespeni MH, Palumbi SR. SNP genotyping and population genomics from expressed sequences –current advances and future possibilitiesMolecular Ecology (2015), doi: 10.1111/mec.13165

Dupont S, Puncher G, Calosi P. Bird is the word – on the importance of ethical and effective scientific communicationJournal of the Marine Biological Association of the United Kingdom (2015), doi:

Dupuy C, Galland C, Pichereau V, Sanchez W, Riso R, Labonne M, Amara R, Charrier G, Fournier M, Laroche J. (2015) Assessment of the European flounder responses to chemical stress in the English Channel, considering biomarkers and life history traitsMarine Pollution Bulletin 95, 634-645. doi:10.1016/j.marpolbul.2014.11.033

Ellis CD, Hodgson DJ, André C, Sørdalen TK, Knutsen H, Griffiths AGF (2015) Genotype Reconstruction of Paternity in European Lobsters (Homarus gammarus)PLoS ONE 10(11): e0139585. doi:10.1371/journal.pone.0139585

Fauville G, Dupont S, von Thun S, Lundin J. Can Facebook be used to increase scientific literacy? A case study of the Monterey Bay Aquarium Research Institute Facebook
page and ocean literacy
Computers & Education (2015), doi: 10.1016/j.compedu.2014.11.003.

Gabre JL, Martinez P, Nilsson Sköld H,Ortega-Martinez O, Abril JF. The coelomic epithelium transcriptome from a clonal sea star, Coscinasterias muricataMarine Genomics (2015) doi:10.1016/j.margen.2015.07.010

García E, Hernández JC, Clemente S, Cohen-Rengifo M, Hernández CA, Dupont S. Robustness of Paracentrotus lividus larval and post‑larval development to pH levels projected for the turn of the century. Marine Biology, 
doi 10.1007/s00227-015-2731-8

Garcia-Cisneros A, Pérez-Portela R, Almroth BC, Degerman S, Palacín C, and Nilsson Sköld H. Long telomeres are associated with clonality in wild populations of the fissiparous starfish Coscinasterias tenuispinaHeredity , (20 May 2015) | doi:10.1038/hdy.2015.43

Gohli J, Leder EH, Garcia-del-Rey E, Johannessen LE, Johnsen A, Laskemoen T, Popp M, Lifjeld JT. The evolutionary history of Afrocanarian blue tits inferred from genome-wide SNPsMolecular Ecology. 2015, 24(1) 180-191, 
doi: 10.1111/mec.13008

Hall-Spencer JM, Thorndyke M, Dupont S. Impact of Ocean Acidification on Marine Organisms—Unifying Principles and New ParadigmsWater 2015, 7, 5592-5598.

Hu M, Li L, Sui Y, Li J, Wang Y, Lu W, Dupont S. Effect of pH and temperature on antioxidant responses of the thick shell mussel Mytilus coruscusFish and Shellfish Immunology (2015) 46:2, 573-583

Hurd CL, Cornwall CR, Dupont S, Gattuso JP, Hoegh-Guldberg O, Gao, Lagos NA. Correspondence - Laboratory seawater studies are justifiedNature (2015) 525: 187.

Jansson A, Norkko J, Dupont S, Norkko A. Growth and survival in a changing environment: Combined effects of moderate hypoxia and low pH on juvenile bivalve Macoma balthicaJournal of Sea Research (2015), doi:10.1016/j.seares.2015.04.006

Jin P, Wang T, Liu N, Dupont S, Beardall J, Boyd PW, Riebesell U, Gao K. Ocean acidification increases the accumulation of toxic phenolic compounds across trophic levelsNature Communications, 6:8714 doi: 10.1038/ncomms9714 (2015)

Johannesson KWhat can be learnt from a snail?Evolutionary Applications. (2015), doi: 10.1111/eva.12277

Jorde PE, Søvik G, Westgaard JI, Albretsen J, André C, Hvingel C, Johansen T, Sandvik AD, Kingsley M, Jørstad KE. Genetically distinct populations of northern shrimp, Pandalus borealis, in the North Atlantic: adaptation to different temperatures as an isolation factorMolecular Ecology
Volume 24, Issue 8, pages 1742–1757, April 2015

Knutsen H, Jorde PE, Gonzalez EB, Eigaard OR,
Pereyra RT, Sannæs H, Dahl M, André C, Søvik G. 
Does population genetic structure support present management
regulations of the northern shrimp (Pandalus borealis)
in Skagerrak and the North Sea
ICES Journal of Marine Science, doi: 10.1093/icesjms/fsu204

Kreiss CM, Michael K, Lucassen M, Jutfelt F, Motyka R, Dupont S, Pörtner HO. Ocean warming and acidification modulate energy budget and gill ion regulatory mechanisms in Atlantic cod (Gadus morhua)Journal of Comparative Physiology B (2015) doi: 10.1007/s00360-015-0923-7

Lane A, Campanati C, Dupont S, Thiyagarajan V. Trans-generational responses to low pH depend on parental gender in a calcifying tubewormScience Report. 2015 Jun 3;5:10847. doi: 10.1038/srep10847.

Lehtonen TK, Kvarnemo C. (2015a). Infections may select for filial cannibalism by impacting egg survival in interactions with water salinity and egg densityOecologia. doi: 10.1007/s00442-015-3246-1

Lehtonen TK, Kvarnemo C. (2015b). Odour cues from suitors' nests determine mating success in a fishBiology Letters, 11, 20150021. doi: 10.1098/rsbl.2015.0021

Leidenberger S, Obst M, Robert Kulawik R, Stelzer K, Heyer K, Alex Hardisty A, Bourlat SJ. Evaluating the potential of ecological niche modelling as a component in marine non-indigenous species risk assessmentsMarine Pollution Bulletin (2015). doi:10.1016/j.marpolbul.2015.04.033

Li L, Lu W, Sui Y, Wang Y, Yasmeen Gul Y, Dupont S. Conflicting Effects of Predator Cue and Ocean Acidification on the Mussel Mytilus coruscus Byssus ProductionJournal of Shellfish Research (2015) 34(2):393-400. 

Mejlon E, De Wit P, Matamoros L, Erséus C. DNA-based phylogeny of the marine genus Heterodrilus(Annelida, Clitellata, Naididae)Journal of Zoological Systematics and Evolutionary Research (2015) 53: 194-199. doi:10.1111/jzs.12092 

Nilsson Sköld H, Baden SP, Looström J, Eriksson SP, Hernroth BE. Motoric impairment following manganese exposure in asteroid echinodermsAquatic Toxicology (2015) 167, 31-37

Nilsson Sköld H, Yngsell D, Mubashishir M, Wallin M.
Hormonal regulation of colour change in eyes of a cryptic fish. Biology Open, doi: 10.1242/​bio.20149993

Pédron N, Morvezen R, Le Moan A, Laroche J, Charrier G. (2015) New set of candidate gene SNPs and microsatellites to disentangle selective and neutral processes shaping population responses of European flounder (Platichthys flesus) to anthropogenic stress in contrasted estuariesConservation Genetics Resources 7, 823-823. doi:10.1007/s12686-015-0492-9

Purushothaman S, Saxena S, Meghah V, Brahmendra Swamy CV, Ortega-Martinez O, Dupont S, Idris M.Transcriptomic and Proteomic analyses of Amphiura filiformis arm tissue-undergoing regenerationJournal of Proteomic 2015, 112: 113-124. doi: 10.1016/j.jprot.2014.08.011

Sassenhagen I, Sefbom J, Godhe A, Rengefors K. Germination and colonization success of Gonyostomum semen(Raphidophyceae) cysts after dispersal to new habitatsJournal of Plankton Research (2015) 0(0): 1–5. doi:10.1093/plankt/fbv067

Sassenhagen I, Sefbom J, Säll T, Godhe A, Rengefors K. Freshwater protists do not go with the flow: population
structure in Gonyostomum semen independent of
connectivity among lakes
Environmental Microbiology (2015) doi:10.1111/1462-2920.12987

Sassenhagen I, Wilken S, Godhe A, Rengefors K.
Phenotypic plasticity and differentiation in an invasive freshwater microalgaHarmful Algae. 2015, 41(2915) 38-45

Schlegel P, Binet MT, Havenhand JN, Doyle CJ, Williamson JE. Ocean acidification impacts on sperm mitochondrial membrane potential bring sperm swimming behaviour near its tipping pointJournal of Experimental Biology 2015 218:1084-1090.

Sefbom J, Sassenhagen I, Rengefors K, Godhe A. 2015 Priority effects in a planktonic bloom-forming marine diatom. Biology Letters. 11: 20150184.

Selander E, Kubanek J, Hamberg M, Andersson MX, Cervin G, Pavia H. Predator lipids induce paralytic shellfish toxins in bloom-forming algaeProceedings of the National Academy of Sciences of the United States of America (PNAS) (2015) 
doi: 10.1073/pnas.1420154112

Sjöqvist C, Godhe A, Jonsson PR, Sundqvist L, Kremp A. Local adaptation and oceanographic connectivity patterns explain genetic differentiation of a marine diatom across the North Sea-Baltic Sea salinity gradientMoleculal Ecology (2015) Jun;24(11):2871-85. doi: 10.1111/mec.13208.

Souche EL, Hellemans B, Babbucci M, MacAoidh E, Guinand B, Bargelloni L, Chistiakov DA, Patarnello T, Bonhomme F, Martinsohn JT, Volckaert FAM. Range-wide population structure of European sea bass Dicentrarchus labraxBiological Journal of the Linnean Society, 2015, 116, 86–105. 

Toth GB, Larsson AI, Jonsson PR, Appelqvist C (2015) Natural Populations of Shipworm Larvae Are Attracted to Wood by Waterborne Chemical CuesPLoS ONE 10(5): e0124950. doi:10.1371/journal.pone.0124950

Volckaert FA. Applying the hidden treasures of population biodiversity to decision making and managementOcean & Coastal Management (2015) 118, 47-50.

Yuan X, Shao S, Dupont S, Meng L, Liu Y, Wang L. Impact of CO2-driven acidification on the development of the sea cucumber Apostichopus japonicus (Selenka) (Echinodermata: Holothuroidea)Marine Pollution Bulletin(2015),


Andersen Ø, De Rosa MC, Yadav P, Pirolli D, Fernandes JMO, Berg PR, Jentoft S, Andrè C. The conserved Phe GH5 of importance for hemoglobin intersubunit contact is mutated in gadoid fishBMC Evolutionary Biology2014, 14:54, doi:10.1186/1471-2148-14-54

Andrén MN, Kvarnemo C. (2014). Filial cannibalism in a nest-guarding fish: females prefer to spawn in nests with few eggs over manyBehavioral Ecology and Sociobiology, 68, 1565-1576. doi: 10.1007/s00265-014-1766-z

Appelqvist C, Havenhand JN, Toth GT. Distribution and abundance of teredinid recruits along the Swedish coast – are shipworms invading the Baltic Sea? Journal of the Marine Biological Association of the United Kingdom,available on CJO2014. doi:10.1017/S0025315414001830. 

Bailly X, ...[ Sam Dupont]... et al. The chimerical and multifaceted marine acoel Symsagittifera roscoffensis: from photosymbiosis to brain regenerationFrontiers in Microbiology, doi: 10.3389/fmicb.2014.00498

Baumgartner FA, Pavia H, Toth GB. Individual Specialization to Non-Optimal Hosts in a Polyphagous Marine Invertebrate HerbivorePLoS ONE 9(8): e102752. doi:10.1371/journal.pone.0102752

Baumgartner FA, Toth GB. Abundance and Size Distribution of the Sacoglossan Elysia viridis on Co-Occurring Algal Hosts on the Swedish West CoastPLoS ONE (2014) 9(3): e92472. doi:10.1371/journal.pone.0092472

Bengtsson-Palme J, Alm Rosenblad M, Molin M, Blomberg A. Metagenomics reveals that detoxification systems are underrepresented in marine bacterial communitiesBMC Genomics, doi: 10.1186/1471-2164-15-749.

Braga Gonçalves I, Mobley KB, Ahnesjö I, Sagebakken G, Jones AG, Kvarnemo C. Effects of mating order and male size on embryo survival in a pipefishBiological Journal of the Linnaean Society, 2014, 114, 639-645. doi: 10.1111/bij.12441

Butlin RK, Saura M, Charrier G, Jackson B, André C, Caballero A, Coyne J A, Galindo J, Grahame JW, Hollander J, Kemppainen P, Martínez-Fernández M, Panova M, Quesada H, Johannesson K, Rolan-Alvarez E. (2014) Parallel evolution of local adaptation and reproductive isolation in the face of gene flow. Evolution 68, 935-949.

Carey N, Dupont S, Lundve B, Sigwart JD. One size fits all: stability of metabolic scaling under warming and ocean acidification in echinodermsMarine Biology, doi 10.1007/s00227-014-2493-8

Delroisse J, Ullrich-Lüter E, Ortega-Martinez O, Dupont S, Arnone MI, Mallefet J, Flammang P. High opsin diversity in a non-visual infaunal brittle star. BMC Genomics 2014, 15:1035 doi:10.1186/1471-2164-15-1035

De Wit P, Rogers-Bennett L, Kudela RM, Palumbi SR. Forensic genomics as a novel tool for identifying the causes of mass mortality eventsNature Communications (2014) 5: 3652. doi:10.1038/ncomms4652

Dupont S, Hall E, Calosi P, Lundve B. First Evidence of Altered Sensory Quality in a Shellfish Exposed to Decreased pH Relevant to Ocean AcidificationJournal of Shellfish Research, 2014, 33(3):857-861.

Eklöf J, Havenhand J, Alsterberg C, Gamfeldt L. Community-level effects of rapid experimental warming and consumer loss outweigh effects of rapid ocean acidificationOikos (2014) doi: 10.1111/oik.01544

Faria R, Renaut S, Galindo S, Pinho C, Melo-Ferreira, Melo M, Jones F, Salzburger W, Schluter D, Butlin R. (2014) Advances in Ecological Speciation: an integrative approach. Molecular Ecology 23, 513-521.

Gaylord B,...[Dupont S]... et al. Ocean acidification through the lens of ecological theory.  Ecology,

Gianguzza P, Visconti G, Gianguzza F, Vizzini S, Sarà G, Dupont S. Temperature modulates the response of the thermophilous sea urchin Arbacia lixula early life stages to CO2-driven acidificationMarine Environmental Research (2014) pii: S0141-1136(13)00123-2. doi:10.1016/j.marenvres.2013.07.008

Godhe A, Kremp A, Montresor M. Genetic and Microscopic Evidence for Sexual Reproduction in the Centric Diatom Skeletonema marinoi. Protist, Vol. 165, 401–416, August 2014

Gräns, A, Jutfelt F, Sandblom E, Jönsson E, Wiklander K, Seth H, Olsson C, Dupont S, Ortega-Martinez O, Einarsdottir I, Björnsson BT, Sundell K, Axelsson M. Aerobic scope fails to explain the detrimental effects on growth resulting from warming and elevated CO2 in Atlantic halibutThe Journal of Experimental Biology (2014) 217, 711-717, doi: 10.1242/​jeb.096743

Harvey BP, et al. Evolution of Marine Organisms under Climate Change at Different Levels of Biological OrganisationWater 2014 6(11) 3545-3574, doi:10.3390/w6113545

Hilmi N, Allemand D, Cinar M, Cooley S, Hall-Spencer JM, Haraldsson G, Hattam C, Jeffree RA, Orr JC, Rehdanz K, Reynaud S, Safa A, Dupont S. Exposure of Mediterranean Countries to Ocean AcidificationWater2014, 6(6), 1719-1744; doi:10.3390/w6061719

Hu MY, Casties I, Stumpp M, Ortega-Martinez O, Dupont ST. Energy metabolism and regeneration impaired by seawater acidification in the infaunal brittlestar, Amphiura filiformis. The Journal of Experimental Biology(2014) Published online. doi: 10.1242/​jeb.100024

Ibstedt S, Stenberg S, Bagés S, Gjuvsland AB, Salinas F, Kourtchenko O, Samy JK, Blomberg A, Omholt SW, Liti G, Beltran G, Warringer J. Concerted Evolution of Life Stage Performances Signals Recent Selection on Yeast Nitrogen UseMolecular Biology and Evolution. 2014 Oct 27. pii: msu285. PMID: 25349282

Keeling PJ, …[Rengefors K]… et al. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome SequencingPLoS Biology 12(6): e1001889. doi:10.1371/journal.pbio.1001889

Lavergne E, Calves I, Meistertzheim AL, Charrier G, Zajonz U, Laroche J. (2014) Complex genetic structure of a catadromous fish in temporarily open closed estuaries from the wider Gulf of Aden. Marine Biology 161, 113-1126.

Moksnes PO, Corell H, Tryman K, Hordoir R, Jonsson PR. Larval behavior and dispersal mechanisms in shore crab larvae (Carcinus maenas): Local adaptations to different tidal environments? Limnology and Oceanography, 59(2), 2014, 588–602

Morris MRJ, R Richard, EH Leder, RDH Barrett, N Aubin-Horth, SM Rogers. 2014. Gene expression plasticity facilitates and evolves in response to colonization of freshwater lakes in threespine sticklebackMolecular Ecology, 23(13):3226-3240.

Navarro A, Faria R. (2014) Pool and conquer: new tricks for (c)old problemsMolecular Ecology 23, 1653-1655.

Leidenberger S, De Giovanni R, Kulawik R, Williams AR, Bourlat SJ. Mapping present and future potential distribution patterns for a meso-grazer guild in the Baltic SeaJournal of Biogeography, doi: 10.1111/jbi.12395

Leder EH, McCairns RJS, Leinonen T, Cano JM, Viitaniemi HM, Nikinmaa M, Primmer CR, Merilä J. The evolution and adaptive potential of transcriptional variation in sticklebacks – signatures of selection and widespread heritabilityMolecular Biology and Evolution, 2014, doi: 10.1093/molbev/msu328.

Panova M, Johansson T, Canbäck B, Bentzer J, Alm Rosenblad M, Johannesson K, Tunlid A, André C. Species and gene divergence in Littorina snails detected by array comparative genomic hybridization. BMC Genomics 2014, 15:687, doi:10.1186/1471-2164-15-687

Papakostas S, Vøllestad LA, Bruneaux M, Aykanat T, Vanoverbeke J, Ning M, Primmer CR, Leder EH. Gene pleiotropy constrains gene expression changes in fish adapted to different thermal conditionsNature Communications 5, Article number: 4071 doi:10.1038/ncomms5071

Ramachandra R, Namburi, RB, Ortega-Martinez O, Shi X, Zaia J, Dupont ST, Thorndyke MC, Lindahl U, Spillman D. Brittlestars contain highly sulfated chondroitin sulfates/dermatan sulfates that promote fibroblast growth factor 2-induced cell signalingGlycobiology (2014) doi: 10.1093/glycob/cwt100, published online

Ritchie MG, Butlin RK. 2014. The genetics of insect mating systems. In: The Evolution of Insect Mating Systems, Shuker DM and Simmons LW. Pp. 59-77. Oxford UP. 

Schlegel P, Havenhand JN, Obadia N, Williamson JE. Sperm swimming in the polychaete Galeolaria caespitosashows substantial inter-individual variability in response to future ocean acidificationMarine Pollution Bulletin(2014),

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Sjöqvist C, Kremp A, Lindehoff E, Båmstedt U, Egardt J, Gross S, Jönsson M, Larsson H, Pohnert G, Richter H, Selander E, Godhe A. Effects of Grazer Presence on Genetic Structure of a Phenotypically Diverse Diatom PopulationMicrobial Ecology (2014) doi: 10.1007/s00248-013-0327-8

Sotelo G, Andree KB, López MA, Alexandrino P, Gisbert E, Faria R. (2014) The puzzling demographic history and genetic differentiation of the twaite shad (Alosa fallax) in the Ebro RiverConservation Genetics 15, 1037-1052

Strand M, Panova M. Size of genera - biology or taxonomy? Zoologica Scripta. 2014, 44, 106-116.

Sunday JM, Calosi P, Dupont S, Munday PL, Stillman JH, Reusch TBH. Evolution in an acidifying oceanTrends in Ecology and Evolution. 2014, Vol. 29, No. 2, 117-125.

Svanfeldt K, Lundqvist L, Rabinowitz C, Nilsson Sköld H, Rinkevich B. Repair of UV-induced DNA damage in shallow water colonial marine speciesJournal of Experimental Marine Biology and Ecology (2014) 452, Pages 40–46.

Telford MJ, Lowe CJ, Cameron CB, Ortega-Martinez O, Aronowicz J, Oliveri P, Copley RR. Phylogenomic analysis of echinoderm class relationships supports AsterozoaProceedings of Biological Sciences. 2014 Jul 7;281(1786). pii: 20140479. doi: 10.1098/rspb.2014.0479.

Thor P, Dupont STransgenerational effects alleviate severe fecundity loss during ocean acidification in a ubiquitous planktonic copepodGlobal Change, (2014) DOI: 10.1111/gcb.12815

Warringer J, Blomberg A. (2014) Yeast Phenomics – Large-Scale Mapping of the Genetic Basis for Organismal Traits. Book chapter in “Phenomics” ed John Hancock. SBN 9781466590953 

Westram AM, Galindo J, Alm Rosenblad M, Grahame JW, Panova M, Butlin RK. Do the same genes underlie parallel phenotypic divergence in different Littorina saxatilis populations? Molecular Ecology, doi: 10.1111/mec.12883

Wood HL, Nylund G, Eriksson SP. Physiological plasticity is key to the presence of the isopod Idotea baltica(Pallas) in the Baltic SeaJournal of Sea Research (2014) 85: 255-262.

Wood HL, Sköld HN, Eriksson SP. Health and population‑dependent effects of ocean acidification on the marine isopod Idotea balthicaMarine Biology, 2014 161(10):2423-2421

Wrange AL, André C, Lundh T, Lind U, Blomberg A, Jonsson PJ, Jon N Havenhand JN. Importance of plasticity and local adaptation for coping with changing salinity in coastal areas: a test case with barnacles in the Baltic SeaBMC Evolutionary Biology 2014, 14:156, doi:10.1186/1471-2148-14-156


Alsterberg C, Eklöf JS, Gamfeldt L, Havenhand JN, Sundbäck K. (2013) Consumers mediate the effects of experimental ocean acidification and warming on primary producersPNAS 2013 : 1303797110v1-201303797

Bengtsson-Palme J, Ryberg M, Hartmann M, Branco S, Wang Z, Godhe A, De Wit P, Sánchez-García M, Ebersberger I, de Sousa F, Amend A, Jumpponen A, Unterseher M, Kristiansson E, Abarenkov K, Bertrand YJK, Sanli K, Eriksson KM, Vik U, Veldre V, Nilsson RH. Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing dataMethods in Ecology and Evolution (2013) 4: 914-919. doi:10.1111/2041-210X.12073

Bradassi F, Cumani F, Bressan G, Dupont S. (2013) Early reproductive stages in the crustose coralline alga Phymatolithon lenormandii are strongly affected by mild ocean acidificationMarine Biology.  doi: 10.1007/s00227-013-2260-2

Calves I, Lavergne E, Meistertzheim AL, Charrier G, Cabral H, Guinand B, Quiniou L, Laroche J. (2013) Genetic structure of European flounder Platichthys flesus: effects of both the southern limit of the species’ range and chemical stress. Marine Ecology Progress Series 472, 257-273. doi:10.3354/meps09797 

Charrier G, Ring AK, Johansson E, Dahl M, Saltin SH, Panova M, Johannesson K, Carl André C. Characterization of new est-linked microsatellites in the rough periwinkle (Littorina saxatilis) and application for parentage analysisJournal of Molluscan Studies (2013) 1-3. doi:10.1093/mollus/eyt027

DeFaveri J, Jonsson PR, Merilä J. Heterogeneous genomic differentiation in marine three-spine sticklebacks: adaptation along an environmental gradientEvolution (2013) 67: 2530-2546, doi: 10.1111/evo.12097 

De Wit P, Palumbi SR. Transcriptome-wide polymorphisms of red abalone (Haliotis rufescens) reveal patterns of gene flow and local adaptationMolecular Ecology (2013) 22: 2884-2897. doi:10.1111/mec.12081

Dorey N, Lancon P, Thorndyke M, Dupont S. Assessing physiological tipping point of sea urchin larvae exposed to a broad range of pHGlobal Change Biology (2013) 
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Dupont S, Pörtner HOA snapshot of ocean acidification researchMarine Biology (2013) 
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Dupont ST, Thorndyke MS. Direct impacts of near-future ocean acidification on sea urchins. In: Fernández-Palacios JM, de Nascimento L, Hernández JC, Clemente S, González A & Díaz-González JP. Climate change perspective from the Atlantic: past, present and future. Servicio de Publicaciones, Universidad de La Laguna. (2013) pp. 461-485. ISBN: 9788415910541

Enge S, Nylund GM, Pavia H. Native generalist herbivores promote invasion of a chemically defended seaweed via refuge-mediated apparent competition. Ecology Letters (2013) 16: 487-492. PubMed 

Eriksson A, Wolff FE, Mehlig B. Metapopulation dynamics on the brink of extinctionTheoretical Population Biology (2013) 83, 101-122.

Evrard E, Devaux A, Bony S, Cachot J, Charrier G, Quiniou L, Laroche J. (2013) Responses of juvenile European flounder (Platichthys flesus) to multistress in the Vilaine estuary, during a 6-month surveyEnvironmental Science and Pollution Research 20, 676-689. doi:10.1007/s11356-012-1138-z

Fauville G, Säljö R, Dupont S. Impact of ocean acidification on marine ecosystems: educational challenges and innovationsMarine Biology (2013), doi: 10.1007/s00227-012-1943-4

Flot J-F, Dahl MP, André C. Lophelia pertusa corals from the Ionian and Barents seas share identical nuclear ITS2 and near-identical mitochondrial genome sequencesBMC Research Notes. (2013) 6: 44.

Godhe A. Using the sediment archive of living dinoflagellate cysts and other protist resting stages to study dynamics through time. In: Biological and Geological Perspectives of Dinoflagellates (The Micropalaeontological Society). Edited by F. Marret, J.M. Lewis & L.R. Bradley, 373 pp. (2013) ISBN 978-1-86239-368-4

Godhe A, Egardt J, Kleinhans D, Sundqvist L, Hordoir R, Jonsson PR. Seascape analysis reveals regional gene flow patterns among populations of a marine planktonic diatomProceedings of the Royal Society B. (2013) 280(1773) 
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Huserbråten MBO, Moland E, Knutsen H, Olsen EM, André C, Stenseth NC. Conservation, spillover and gene flow within a network of northern MPAsPLoS ONE. Joyce A, Holthuis TD, Charrier G, Lindegarth S. (2013) Experimental effects of temperature and photoperiod on synchrony of gametogenesis and sex ratio in the European oyster, Ostrea edulis (Linnaeus)Journal of Shellfish Research 31, 213-221. doi:10.2983/035.032.0225

Kvarnemo C, Simmons LW. Polyandry as a mediator of sexual selectiuon before and after matingPhilosofical Transactions of the Royal Society B (2013) 368 (1613) 20120042. 
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Lebret K, Kritzberg ES,Rengefors K. Population Genetic Structure of a Microalgal Species under ExpansionPLoS ONE 8(12): e82510. doi:10.1371/journal.pone.0082510

Lind U, Alm Rosenblad M, Wrange A-L, Sundell KS, Jonsson PR, André C, Havenhand J, Blomberg A. Molecular Characterization of the α-Subunit of Na+/K+ ATPase
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Nasrolahi A, Pansch C, Lenz M, Wahl M. Temperature and salinity interactively impact early juvenile development: a bottleneck in barnacle ontogenyMarine Biology (2013). 
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Ng TPT, Saltin SH, Davies MS, Johannesson KStafford R, Williams GASnails and their trails: the multiple functions of trail-following in gastropodsBiological Reviews (2013) 88: 683-700. doi: 10.1111/brv.12023

Nylund GM, Enge S, Pavia HCosts and benefits of chemical defence in the red alga Bonnemaisonia hamiferaPLoS ONE (2013) 8(4): e61291

Pansch C, Schaub I, Havenhand J, Wahl M. Habitat traits and food availability determine the response of marine invertebrates to ocean acidificationGlobal Change Biology. (2013). doi: 10.1111/gcb.12478

Pansch C, Schlegel P, Havenhand J. Larval development of the barnacle Amphibalanus improvisus responds variably but robustly to near-future ocean acidificationICES Journal of Marine Science (2013), 70(4), 805–811. doi:10.1093/icesjms/fst092

Pedroso SS, Barber I, Svensson O, Fonseca PJ, Amorim MCP. Courtship Sounds Advertise Species Identity and Male Quality in Sympatric Pomatoschistus spp. GobiesPLoS ONE (2013)8(6): e64620. doi:10.1371/journal.pone.0064620

Pereyra RT, Huenchuñir C, Johansson D, Forslund H, Kautsky L, Jonsson PR, Johannesson K.  Parallel speciation or long-distance dispersal? Lessons from seaweeds (Fucus) in the Baltic SeaJournal of Evolutionary Biology (2013), doi: 10.1111/jeb.12170

Rafajlovic M, Eriksson A, Rimark A, Saltin SH, Charrier G, Panova M, André C, Johannesson K, Mehlig B.2013. The effect of multiple paternity on genetic diversity of small populations during and after colonisationPLoS ONE 8(10): e75587. doi:10.1371/journal.pone.0075587

Saltin SH, Schade H, Johannesson K.
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Saxena S, Dupont S, Meghah V, Meena Lakshmi MG, Singh SK, Brahmendra Swamy CV, Idris MM.Proteome map of the neural complex of the Tunicate Ciona intestinalis, the closest living relative to vertebratesProteomics (2013) doi: 10.1002/pmic.201200148

Stumpp M, Hu M, Casties I, Saborowski R, Bleich M, Melzner F, Dupont S. Digestion in sea urchin larvae impaired under ocean acidificationNature Climate Change (2013) doi:10.1038/nclimate2028

Styf H, Nilsson Sköld H, Eriksson S. Embryonic response to long-term exposure of the marine crustacean Nephrops norvegicus to ocean acidification and elevated temperatureEcology and Evolution (2013) doi: 10.1002/ece3.860 

Tait K, Havenhand JN. Investigating a possible role for the bacterial signal molecules N-acylhomoserine lactones in Balanus improvisus cyprid settlement.  Molecular Ecology (2013) 22: doi: 10.1111/mec.12273.

Teacher AGF, André C, Jonsson PR, Merilä J. Oceanographic connectivity and environmental correlates of genetic structuring in Atlantic herring in the Baltic SeaEvolutionary Applications (2013) 6:549-567. doi: 10.1111/eva.12042

Vihtakari M, Hendriks IE, Holding J, Renaud PE, Duarte CM, Havenhand JN. Effects of Ocean Acidification and Warming on Sperm Activity and Early Life Stages of the Mediterranean Mussel (Mytilus galloprovincialis)Water 2013, 5, 1890-1915; doi:10.3390/w5041890

Wangensteen OS, Dupont S, Casties I, Turon X, Palacína C. Some like it hot: Temperature and pH modulate larval development and settlement of the sea urchin Arbacia lixulaJournal of Experimental Marine Biology and Ecology (2013) 449: 304-311

Weber AAT, Dupont S, Chenuila A. Thermotolerance and regeneration in the brittle star species complex Ophioderma longicauda: A preliminary study comparing lineages and Mediterranean basinsComptes Rendus BiologiesPublished online. 

Wennerström L, Laikre L, Ryman N, Utter FM, Ab Ghani NI, André C, DeFaveri J, Johansson D, Kautsky L, Merilä J, Mikhailova N, Pereyra R, Sandström A, Teacher AGF, Wenne R, Vasemägi A, Zbawicka M, Johannesson K, Primmer CR. Genetic biodiversity in the Baltic Sea: species-specific patterns challenge managementBiodiversity and Conservation. DOI 10.1007/s10531-013-0570-9

Zörgö E, Chwialkowska K, Gjuvsland AB, Sunnerhagen P, Liti G, Blomberg A, Omholt SW, Warringer J.Ancient evolutionary trade-offs between yeast ploidy statesPlos Genetics, (2013) 9:e1003388


Berglund M, Nilsson Jacobi M, Jonsson PR. Optimal selection of marine protected areas based on connectivity and habitat qualityEcological Modelling (2012) 240, 105-112

Björk JR, Kvarnemo C. (2012). Mechanisms behind size-assortative nest choice by sand goby males in absence of intrasexual competition. Animal Behaviour (2012) 83(1): 55–62. doi:10.1016/j.anbehav.2011.09.033

Brander K, Havenhand J. Impacts of Climate Change, Including Acidification, on Marine Ecosystems and Fisheries. In: Reckermann M., Brander K., MacKenzie B. R. & Omstedt A. (Eds.), Climate impacts on the Baltic Sea: from science to policy, pp 129-160. Berlin Heidelberg: Springer-Verlag. 

Burns G, Ortega-Martinez O, Dupont S, Thorndyke MC, Peck LS, Clark MS. Intrinsic gene expression during regeneration in arm explants of Amphiura filiformisJournal of Experimental Marine Biology and Ecology 413 (2012) 106–112.

Canbäck B, André C, Galindo J, Johannesson K, Johansson T, Panova M, Tunlid A, Butlin R. The Littorina sequence database (LSD) – an online resource for genomic data.
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Carney Almroth B, Sköld M, Nilsson Sköld H. Gender differences in health and aging of Atlantic cod subject to size selective fisheryBiology Open 000, (2012) 1–7. doi: 10.1242/bio.20121446

Chan KYK, Grünbaum D, Arnberg M, Thorndyke M, Dupont ST. Ocean acidification induces budding in larval sea urchins. Published online in Marine Biology (2012). 7 pp. doi: 10.1007/s00227-012-2103-6

Charrier G, Morvezen R, Calves I, Laroche J. (2012) Development of new microsatellite markers derived from expressed sequence tags for the great scallop (Pecten maximus). Conservation Genetic Resources (2012) 4: 931.

Chauvaud L, Patry Y, Jolivet A, Cam E, Le Goff C, Strand Ø, Charrier G, Thébault J, Lazure P, Gotthard K, Clavier JVariation in Size and Growth of the Great Scallop Pecten maximus along a Latitudinal GradientPLoS ONE (2012) 7(5): e37717. doi:10.1371/journal.pone.0037717

Corell H, Moksnes PO, Engqvist A, Döös K, Jonsson PR. Depth distribution of larvae critically affects their dispersal and the efficiency of marine protected areasMarine Ecology Progress Series (2012) 467:29-46, doi: 10.3354/meps09963

Dahl MP, Pereyra RT, Lundälv T, André C. Fine-scale spatial genetic structure and clonal distribution of the cold-water coral Lophelia pertusaCoral Reefs. (2012) 31: 1135-1148.

Dupont S, Dorey N, Stumpp M, Melzner F, Thorndyke M. Long-term and trans-life-cycle effects of exposure to ocean acidification in the green sea urchin Strongylocentrotus droebachiensis. Published online in Marine Biology(2012)
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Dupont S, Moya A, Bailly X. Stable Photosymbiotic Relationship under CO2-Induced Acidification in the Acoel Worm Symsagittifera RoscoffensisPLoS ONE 7(1): e29568. doi:10.1371/journal.pone.0029568

Dupont S, Thorndyke M. Relationship between CO2-driven changes in extracellular acid–base balance and cellular immune response in two polar echinoderm speciesJournal of Experimental Marine Biology and Ecology(2012), Vol 424-425, 32-37. doi:10.1016/j.jembe.2012.05.007

Eklöf JS, Alsterberg C, Havenhand JN, Sundbäck K, Wood HL, Lars Gamfeldt L. Experimental climate change weakens the insurance effect of biodiversityEcology Letters (2012) 15(8): 864–872
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Harding KC, Begon M, Eriksson A, Wennberg B. Increased migration in host–pathogen metapopulations can cause host extinctionJournal of Theoretical Biology, 298 (2012) 1–7

Harkonen T, Harding KC, Wilson S, et al. Collapse of a Marine Mammal Species Driven by Human ImpactsPlos ONE (2012) 7

Havenhand JN. How will Ocean Acidification Affect Baltic Sea Ecosystems? An Assessment of Plausible Impacts on Key Functional GroupsAMBIO 2012, 41:637-644. doi 10.1007/s13280-012-0326-x

Hernroth B, Nilsson Sköld H, Wiklander K, Jutfelt F, Baden S. Simulated climate change causes immune suppression and protein damage in the crustacean Nephrops norvegicus
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Hilmi N, Allemand D, Dupont S, Safa A, Haraldsson G, Nunes PALD, Moore C, Hattam C, Reynaud S, Hall-Spencer JM, Fine M, Turley C, Jeffree R, Orr J, Munday PL, Cooley SR. Towards improved socio-economic assessments of ocean acidification’s impacts. 
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Johannesson K, Forslund H, Åstrand Capetillo N, Kautsky L, Johansson D, Pereyra RT, Råberg S. Phenotypic variation in sexually and asexually recruited individuals of the Baltic Sea endemic macroalga Fucus radicans: in the field and after growth in a common-gardenBMC Ecology 2012, 12:2 doi:10.1186/1472-6785-12-2

Kremp A, Godhe A, Egardt J, Dupont S, Suikkanen S, Casabianca S, Penna A. Intraspecific variability in the response of bloom-forming marine microalgae to changed climate conditions. Published online in Ecology and Evolution, doi: 10.1002/ece3.245

Lebret K, Fernandez M, Corneliussen Hagman CH, Rengefors K, Hansson L-A. Grazing resistance allows bloom formation and may explain invasion success of Gonyostomum semen. Limnology & Oceanography 2012, 57(3):727-734
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Leidenberger S, Harding K, Jonsson PR. 
Ecology and distribution of the isopods Idotea spp. in the Baltic Sea: key species in a changing environment. Journal of Crustacean Biology 2012, 32: 359-381

Limborg MT, Hanel R, Debes PV, Ring AK, André C, Tsigenopoulos CS, Bekkevold D. Imprints from genetic drift and mutation imply relative divergence times across marine transition zones in a pan-European small pelagic fish (Sprattus sprattus). Published online in Heredity (2012), 00, 1-12, doi:10.1038/hdy.2012.18

Luttikhuizen PC, Drent J, van der Veer HW, Johannesson K. Genetic architecture in a marine hybrid zone: outlier detection and genomic clone analysis in the marine bivalve Macoma balthica. Published online in Molecular Ecology (2012), doi: 10.1111/j.1365-294X.2012.05586.

Meier H, H Andersson, B Arheimer, T Blenckner, B Chubarenko . . . JN Havenhand et al., (2012) Comparing reconstructed past variations and future projections of the Baltic-Sea ecosystem – first results from multi-model ensemble simulationsEnvironmental Research Letters 7: doi: 10.1088/1748-9326/7/3/034005 

Nilsson Jacobi M, André C, Döös K, Jonsson PR. Identification of subpopulations from connectivity matrices. Published online in Ecography, 11 JUN 2012. 
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Nylund GM, Pereyra RT, Wood, HL, Johannesson K, Pavia H. Increased resistance towards generalist herbivory in the new range of a habitat-forming seaweedEcosphere (2012) 3(12):125. ES12-00203.1

Pavia H, Baumgartner F, Cervin G, Enge S, Kubanek J, Nylund GM, Selander E, Svensson RJ, Toth GB. Chemical defences against herbivores, in Chemical Ecology in Aquatic Systems, editors Brönmark C, Hansson LA, Oxford University Press. 2012, 210-235.

Pereyra RT, Westgaard JI, Dahl M, Johansen T, Knutsen H, Ring AK, Søvik G, André C. Isolation and characterization of nuclear microsatellite loci in the northern shrimp, Pandalus borealisConservation Genetic Resources, (2012) 4(1) 109-112. doi:10.1007/s12686-011-9486-4

Roger F, Godhe A, Gamfeldt L. Genetic Diversity and Ecosystem Functioning in the Face of Multiple StressorsPLoS ONE 7(9): e45007. doi:10.1371/journal.pone.0045007

Schaper E, Eriksson A, Rafajlovic M, Sagitov S, Mehlig B. Linkage disequilibrium under recurrent bottlenecksGenetics (2012) 190, 217 

Schlegel P, Havenhand JN, Gillings MR, Williamson JE. Individual variability in reproductive success determines winners and losers under ocean acidification: A case study with sea urchinsPLoS ONE (2012) 7(12): e53118. doi:10.1371/journal.pone.0053118

Selander E, Fagerberg T, Wohlrab S, Pavia H. Fight and flight in Dinoflagellates? -Kinetics of simultaneous grazer induced responses in Alexandrium tamarenseLimnology & Oceanography. (2012) 57(1):58-64.

Stumpp M, Hu MY, Melznerb F, Gutowska MA, Dorey N, Himmerkusa N, Holtmanna WC, Dupont ST, Thorndyke MC, Bleicha M. Acidified seawater impacts sea urchin larvae pH regulatory systems relevant for calcificationPNAS Early edition.

Sundqvist L, Harkonen T, Svensson CJ, Harding KC. Linking climate trends to population dynamics in the Baltic Ringed Seal: Impacts of historical and future winter temperaturesAMBIO, doi 10.1007/s13280-012-0334-x

Svensson JR, Lindegarth M, Jonsson PR, Pavia H. Disturbance-diversity models: what do they really predict and how are they tested? Proceedings of the Royal Society B (2012) 279: 2163-2170. doi: 10.1098/rspb.2011.2620

Svensson JR, Nylund GM, Cervin G, Toth GB, Pavia H. Novel chemical weapon of an exotic macroalga inhibits recruitment of native competitors in the invaded rangeJournal of Ecology (2012) 101: 140-148. doi: 10.1111/1365-2745.12028

Teacher AGF, André C, Merilä J, Wheat CWWhole mitochondrial genome scan for population structure and selection in the Atlantic herringBMC Evolutionary Biology (2012) 12:248 doi:10.1186/1471-2148-12-248

Takegaki T, Svensson O, Kvarnemo C. Socially induced tactic change in 2 types of sand goby sneaker malesBehavioral Ecology. (2012). doi:10.1093/beheco/ars022 

Thomsen J, Casties I, Pansch C, Körtzinger A, Melzner F. Food availability outweighs ocean acidification effects in juvenile Mytilus edulis: laboratory and field experimentsGlobal Change Biology (2012). doi: 10.1111/gcb.12109

Troedsson C, Bouquet JM, Lobon, CM, Novac A, Nejstgaard JC, Dupont S, Bosak S, Jakobsen HH, Romanova N, Pankoke LM, Isla A, Dutz J, Sazhin AF, Thompson EM. Effects of ocean acidification, temperature and nutrient regimes on the appendicularian Oikopleura dioica: a mesocosm studyMarine Biology(2012). Published online. doi:10.1007/s00227-012-2137-9

Zörgö E, Gjuvsland A, Cubillos FA, Louis EJ, Liti G, Blomberg A, Omholt SW, Warringer J. Life History Shapes Trait Heredity by Accumulation of Loss-of-Function Alleles in YeastMolecular Biology and Evolution(2012) 29(7):1781–1789. doi:10.1093/molbev/mss019


Andersen O, De Rosa MC, Pirolli D, Tooming-Klunderud A, Petersen PE, André C.Polymorphism, selection and tandem duplication of transferrin genes in Atlantic cod (Gadus morhua) - Conserved synteny between fish monolobal and tetrapod bilobal transferrin loci. BMC Genetics (2011) 12:51. doi:10.1186/1471-2156-12-51

André C, Larsson LC, Laikre L, Bekkevold, D, Brigham J, Carvalho GR, Dahlgren TG, Hutchinson WF, Mariani S, Mudde K, Ruzzante DE, Ryman N. 
Detecting population structure in a high gene-flow species, Atlantic herring (Clupea harengus): direct, simultaneous evaluation of neutral vs putatively selected loci. Heredity (2011) 106: 270-280

Blomberg A. Measuring growth rate in high-throughput growth phenotyping. Current Opinion in Biotechnology2011, 22:94–102.

Braga Goncalves I, Ahnesjö I, Kvarnemo C. The relationship between female body size and egg size in pipefishesJournal of Fish Biology (2011) 78: 1847–1854. doi:10.1111/j.1095-8649.2011.02984.x

Brown WRA, Liti G, Rosa C, James S, Roberts I, Robert V, Jolly N, Tang W, Baumann P, Green C, Schlegel K, Young J, Hirchaud F, Leek S, Thomas G, Blomberg A, Warringer J. A Geographically Diverse Collection of Schizosaccharomyces pombe Isolates Shows Limited Phenotypic Variation but Extensive Karyotypic DiversityG3: Genes, Genomes, Genetics (2011) 1(7):615-626

Burns G, Ortega-Martinez O, Thorndyke MC, Lloyd SP, Dupont S, Clark MS. 
Dynamic gene expression profiles during arm regeneration in the brittle star Amphiura filiformisJournal of Experimental Marine Biology and Ecology (2011) 407:315-322. doi:10.1016/j.jembe.2011.06.032

Cubillos FA, Billi E, Zörgö E, Parts L, Fargier P, Omholt S, Blomberg A, Warringer J, Louis EJ, Liti G.
Assessing the complex architecture of polygenic traits in diverged yeast populationsMolecular Ecology (2011) 20:1401. 

Findlay HS*, Wood HL,* Kendall MA, Spicer JI, Twitchett RJ, Widdicombe S. Comparing the impact of high CO2 on calcium carbonate structures in different marine organismsMarine Biology Research (2011) 7(6): 565-575 *joint 1st authorship

Greeshma N, Godhe A, Blomberg A, Johander P. Orientation and immobilisation of diatoms. In: Kuck, H., Reinecke, H., and Dimov, S. (eds) Proceedings of the 8th International Conference on Multi-Material Micro Manufacture (4M 2011) DOI: 10.3850/978-981-07-0319-6_255. p. 172-175.
       Hernroth B, Baden S., Thorndyke, M, Dupont S. Immune suppression of the echinoderm Asterias rubens (L.) following long-term ocean acidificationAquatic Toxicology (2011) 103:222-224, doi:10.1016/j.aquatox.2011.03.001

Härnström K, Ellegaard, M, Andersen TJ, Godhe A. Hundred years of genetic structure in a sediment revived diatom populationProceedings of the National Academy of Sciences of the United States of America (PNAS), (2011) 108 ( 10 ) s. 4252-4257. doi 10.1073/pnas.1013528108. 

Jaspers C, Møller LF, Kiørboe T. Salinity Gradient of the Baltic Sea Limits the Reproduction and Population Expansion of the Newly Invaded Comb Jelly Mnemiopsis leidyiPloS One (2011) 6(8): e24065. doi:10.1371/journal.pone.0024065

Johannesson K, Johansson D, Larsson KH, Huenchuñir CJ, Perus J, Forslund H, Kaustky L, Pereyra RT. 
Frequent clonality in fucoids (Fucus radicans and Fucus vesiculosus; Fucales, Phaeophyceae) in the Baltic Sea. Journal of Phycology (2011) 47, 990-998

Johannesson K, Smolarz K, Grahn M, André C. 
The Future of Baltic Sea Populations: Local Extinction or Evolutionary Rescue? AMBIO (2011) 40:179–190, DOI 10.1007/s13280-010-0129-x

Järvi-Laturi M, Lindström K, Kvarnemo C, Svensson O. 
Sand goby males trade off between defence against egg predators and sneak intrusions. Journal of Zoology (2011) 283:269-275 doi:10.1111/j.1469-7998.2011.00788.x

Kemppainen P, Lindskog T, Butlin R, Johannesson K.
Intron sequences of arginine kinase in an intertidal snail suggest an ecotype-specific selective sweep and a gene duplication.
Heredity 2011, 2016(5):808-16. doi:10.1038/hdy.2010.123

Kleinhans D, Jonsson PR. 
On the impact of dispersal asymmetry on metapopulation persistence. Journal of Theoretical Biology (2011) 290:37-45

Knutsen H, Olsen EM, Jorde PE, Espeland, SH, André C, Stenseth NC. 
Are low but statistically significant levels of genetic differentiation in marine fishes ‘biologically meaningful’? A case study of coastal Atlantic cod. Molecular Ecology (2011) 20, 768-783. doi:10.1111/j.1365-294X.2010.04979.x

Kvarnemo, C.
Stressed singers and symmetric loversBehavioral Ecology (2011) 22: 11-12. doi: 10.1093/beheco/arq082

Kvarnemo, C, Mobley, KB, Partridge, C, Jones, AG, 
Ahnesjö I
Evidence of paternal nutrient provisioning to embryos in the pipefish Syngnathus typhleJournal of Fish Biology 78: 1725-1737. doi:10.1111/j.1095-8649.2011.02989.x

Leclerc M, Dupont S, Ortega-Martinez O, Hernroth B, Krezdornc N, Rotter BEvidence of Kappa genes in the sea-star Asterias rubens (Echinoderma)Immunology Letters (2011) 138(2): 197-198.

Li Z, [.. Blomberg A..] et al. (2011). Systematic exploration of essential yeast gene function with temperature-sensitive mutants. Nature Biotechnology (2011) 29(4):361-367; doi:10.1038/nbt.1832

Martin S, Richier S, Pedrotti ML, Dupont S, Castejon C, Gerakis Y, Kerros ME, Oberhänsli F, Teyssié JL, Jeffree R, Gattuso JPEarly development and molecular plasticity in the Mediterranean sea urchin Paracentrotus lividus exposed to CO2-driven acidificationJournal of Experimental Biology (2011) 214: 1357-1368 

Mehmood T, Martens H, Sæbø S, Warringer J, Snipen L. Mining for genotype-phenotype relations in Saccharomyces using partial least squares. BMC Informatics. (2011) 12:318

Mobley KB, Kvarnemo C, Ahnesjö I, Partridge C, Berglund A, Jones AG. The effect of maternal body size on embryo survivorship in the broods of pregnant male pipefishBehavioral Ecology and Sociobiology. (2011) 65: 1169-1177. doi:10.1007/s00265-010-1129-3

Nilsson Jacobi M, Jonsson PR. Optimal networks of nature reserves can be found through eigenvalue perturbation theory of the connectivity matrixEcological Applications (2011) 21(5):1861–1870

Nilsson Sköld H, Asplund ME, Woods CA & Bishop JDD. Telomerase deficiency in a colonial ascidian after prolonged asexual propagationJournal of Experimental Zoology (Mol Dev Evol). (2011) 312:276-283.

Nilsson Sköld H, Obst M. (2011). Potential for clonal animals in longevity and ageing studies. Biogerontology. Invited review. DOI: 10.1007/s10522-011-9333-8

Nilsson Sköld H, Stach T, Bishop JDD, Herbst E, Thorndyke M. Pattern of Cell Proliferation During Budding in the Colonial Ascidian Diplosoma listerianum. Biological Bulletin (2011) 221: 126-136

Panova M, Blakeslee AMH, Miller AW, Mäkinen T, Ruiz GM, Johannesson K, André C. Glacial History of the North Atlantic Marine Snail, Littorina saxatilis, Inferred from Distribution of Mitochondrial DNA LineagesPLoS ONE 6(3): e17511. doi:10.1371/journal.pone.0017511

Parts L, Cubillos FA, Warringer J, Jain K, Salinas F, Bumpstead SJ Molin M, Zia A, Simpson JT, Quail MA, Moses A, Louis EJ, Durbin R , Liti G. Revealing the genetic structure of a trait by sequencing a population under selectionGenome Research (2011) 21(7):1131-1138  
doi: 10.1101/gr.116731.110 

Persson F, Svensson R, Nylund GM, Fredriksson J, Pavia H, Hermansson M.  Ecological role of a seaweed secondary metabolite for a colonizing bacterial communityBiofouling (2011) 27:579-588

Sagebakken G, Ahnesjö I, Braga Gonçalves I, Kvarnemo C. Multiply-mated males show higher embryo survival in a paternally caring fishBehavioral Ecology (2011) 22:625-629. doi:10.1093/beheco/arr023

Sjögren M, Jonsson PR, Dahlström M, Lundälv T, Burman R, Göransson U, Bohlin L. Two brominated cyclic dipeptides released by the coldwater marine sponge Geodia barretti act in synergy as chemical defenseJournal of Natural products (2011) 74: 449–454

Stumpp M, Dupont S, Thorndyke MC, Melzner F. CO2 induced acidification impacts sea urchin larval development II: Gene expression patterns in pluteus larvae.
Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology (2011) 160(3):320-330,

Stumpp M, Wren J, Melzner F, Thorndyke MC, Dupont S. (2011) CO2 induced seawater acidification impacts sea urchin larval development I: Elevated metabolic rates decrease scope for growth and induce developmental delayComparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology (2011) 160(3):331-340. 

Svedäng H, Cardinale M, André C. 2011. Recovery of former fish productivity: the natal homing mechanism puts depleted stocks in a unforeseen deadlock. In: Ecosystem Based Management for Fisheries: An Evolving Perspective 
(Editors: Andrea Belgrano, Charles W. Fowler ) Cambridge University Press. doi:10.1017/CBO9780511973956.011

Ullrich-Lüter EM, Dupont S, Arboleda E, Hausen H, Arnone MI. Unique system of photoreceptors in sea urchin tube feet. Published online in Proceedings of the National Academy of Science of the states of America(PNAS), (2 May 2011); doi: 10.1073/pnas.1018495108. This paper was highlighted in Nature Research HighlightsNature 473, 126–127 (12 May 2011) doi:10.1038/473126e

Warringer J, Zörgö E, Cubillos FA, Zia A, Gjuvsland A, Simpson JT, Forsmark A, Durbin R, Omholt SW, Louis EJ, Liti G, Moses A, Blomberg A. Trait Variation in Yeast Is Defined by Population HistoryPLoS Genetics(2011) 7(6): e1002111. doi:10.1371/journal.pgen.1002111

Wood HL, Spicer JI Lowe DM & Widdicombe S. Ocean warming and acidification; implications for the Arctic brittlestar Ophiocten sericeumPolar Biology (2011) 34(7): 1033-1044, doi: 10.1007/s00300-011-0963-8 

Yang I, Selander E, Pavia H, John U. Grazer-induced toxin formation in dinoflagellates: a transcriptomic model studyEuropean Journal of Phycology. (2011) 46(1):66-73


 André C, Knutsen H. Development of twelve novel microsatellite loci in the European lobster (Homarus gammarus)Conservation Genetics Resources (2010) 2(1):233-236, doi: 10.1007/s12686-009-9151-3

Biressi A, Zou T, Dupont S, Dahlberg C, Di Benedetto C, Bonasoro F, Thorndyke M & Candia Carnevali MD. Wound-healing and arm regeneration in  Ophioderma longicaudum and Amphiura filiformis (Echinodermata: Ophiuroidea): comparative morphogenesis and histogenesisZoomorphology. (2010) 129:1-19.

Carey C, Rengefors K. The cyanobacterium Gloeotrichia echinulata stimulates the growth of other phytoplanktonJournal of Plankton Research. (2010) 32:1349-1354. 

Dupont S, Dorey N, Thorndyke M. (2010). 
What meta-analysis can tell us about vulnerability of marine biodiversity to ocean acidification? Estuarine, Coastal and Shelf Science 89(2010) 182-185

Dupont S, Lundve B, Thorndyke M. (2010). Near future ocean acidification increases growth rate of the lecithotrophic larvae and juvenile of the seastar Crossaster papposus.The Journal of Experimental Zoology (Mol. Dev. Evol.) 314B:[1-8].

Dupont S, Ortega-Martinez O, Thorndyke M. (2010). Impact of near-future ocean acidification on echinoderms.Ecotoxicology, Published online 5 February 2010, DOI: 10.1007/s10646-010-0463-6

Eriksson A, Mehlig B, Panova M, André C, Johannesson K. (2010). Multiple paternity: determining the minimum number of sires of a large broodMolecular Ecology Resources. 10 (2) p. 282-291. DOI: 10.1111/j.1755-0998.2009.02753.x

Eriksson A, Mehlig B, Rafajlovic M, S. Sagitov S. The total branch length of sample genealogies in populations of variable sizeGenetics 186 , 601 (2010)

Figueroa R I, Rengefors K, Bravo I,  Bensch S. From homothally to heterothally; mating preferences and genetic variation within clones of the dinoflagellate Gymnodinium catenatumDeep Sea Research II. 57:190-198

Forslund H, Wikström S, Pavia H. (2010) Higher resistance to herbivory in introduced compared to native populations of a seaweedOecologia 164:833-840. 

Frommel AY, Stiebens V, Clemmesen C, Havenhand JN. (2010) Effect of ocean acidification on marine fish sperm (Baltic Cod: Gadhus morhua)Biogeosciences (2010) 7: 3915-3919. doi:10.5194/bg-7-3915-2010

Godhe A, Härnström K. (2010) Linking the planktonic and benthic habitat: genetic structure of the marine diatom Skeletonema marinoiMolecular Ecology, doi: 10.1111/j.1365-294X.2010.04841.x

Goncalves IB, Mobley KB, Ahnesjö I, Sagebakken G, Jones AG, Kvarnemo C. (2010). Reproductive compensation in broad-nosed pipefish females. Proceedings of the Royal Society of London B. doi:10.1098/rspb.2009.2290

Havenhand JN, Styan CA (2010) Reproduction and larvae/spore types. In: Dürr, S. & JC Thomason (eds) Biofouling. Wiley-Blackwell, Oxford. p 1-15.

Hernroth B, Farahani F, Brunborg G, Dupont S, Dejmek A, & Nilsson Sköld H. (2010). Possibility of mixed progenitor cells in sea star arm regenerationJournal of Experimental Zoology B (Mol Dev Evol). 314B: 457–468.

Johannesson K. (2010) Are we analyzing speciation without prejudice? Annals of the New York Academy of Science 1206 (2010) 143–149. doi: 10.1111/j.1749-6632.2010.05701.x

Johannesson K, Panova M, Kemppainen P, André C, Rolán-Alvarez E, Butlin RK. (2010). Repeated evolution of reproductive isolation in a marine snail - unveiling mechanisms of speciationPhilosophical Transactions of the Royal Society B.365, 1735-1747. DOI: 10.1098/rstb.2009.0256

Johannesson K, Saltin SH, Duranovic I, Havenhand JN, Jonsson PR. (2010). Indiscriminate Males: Mating Behaviour of a Marine Snail Compromised by a Sexual Conflict? PLoS ONE 2010, 5(8), e12005, 7 pp.

Karlson B, Godhe A, Cusack C, Bresnan E (2010) Introduction to methods for quantitative phytoplankton analysis. In: Karlson B, Cusack C, Bresnan E (eds) Microscopic and molecular methods for quantitative phytoplankton analysis. Paris, UNESCO. (IOC Manuals and Guides, no. 55.) (IOC/2010/MG/55), 110 pages

Kemppainen P, Lindskog T, Butlin R, Johannesson K. (2010). Intron sequences of arginine kinase in an intertidal snail suggest an ecotype-specific selective sweep and a gene duplicationHereditydoi:10.1038/hdy.2010.123, 9 pp.

Kvarnemo, C. (2010). Parental care. In: Evolutionary Behavioral Ecology (Eds D F Westneat & C W Fox). Oxford University Press, New York. 

Kvarnemo C, Svensson O, Manson W (2010). Investment in testes, sperm duct glands and lipid reserves differ between male morphs but not between early and late breeding season in Pomatoschistus minutusJ. Fish. Biol.
Doi: 10.1111/j.1095-8649.2010.02587.x

Larsson LC, Laikre L, André C, Dahlgren TG, Ryman N. (2010) Temporally stable genetic structure of heavily exploited Atlantic herring (Clupea harengus) in Swedish waters. Heredity, 104:40-51.

Lind U, Alm Rosenblad M, Hasselberg Frank L, Falkbring S, Brive L, Laurila JM, Pohjanoksa K, Vuorenpää A, Kukkonen JP, Gunnarsson L, Scheinin M, Lindblad L, Blomberg A. (2010) Octopamine receptors from the barnacle Balanus improvisus are activated by the α2-adrenoceptor agonist medetomidine.Molecular Pharmacology 2010 Aug;78(2):237-48.

Nilsson Sköld H, Svensson PA & Zejlon C. (2010). The capacity for internal colour change is related to body transparency in fishesPigment Cell Melanoma Research. 23; 292–295.

Nylund GMPersson FLindegarth MCervin GHermansson MPavia H. (2010) The red alga Bonnemaisonia asparagoides regulates epiphytic bacterial abundance and community composition by chemical defenceFEMS Microbiology Ecology 71: 84-93.

Panova M, Boström J, Hovfing T, Areskoug T, Eriksson A, Mehlig B, Mäkinen T, André C, Johannesson K. (2010) Extreme female promiscuity in a non-social invertebrate speciesPLoS ONE, 5(3):e9640. doi:10.1371/journal.pone.0009640

Rehnstam-Holm A-S, Godhe A, Härnström K, Raghunath PR, Saravanan V, Kronkvist B, Karunasagar I, Karunasagar I. (2010). Association between Phytoplankton and Vibrio spp along the southwest coast of India- a mesocosm experimentAquatic Microbial Ecology, 58:127-139.

Rodrigues-Grana L, Calliari D, Tiselius P, Hansson B & Nilsson Sköld H. (2010). Gender differences and non-mendelian inheritance of oxidative damage in marine copepods. Marine Ecology Progress Series. 401: 1-13. Selected as Feature Article.

Sagebakken G, Ahnesjö I, Mobley KB, Gonçalves IB, Kvarnemo C. (2010) Brooding fathers, not siblings, take up nutrients from embryosProceedings of the Royal Society of London B. 277:971-977. 
doi: 10.1098/rspb.2009.1767

Saravanan V, Godhe A. (2010) Genetic heterogeneity and physiological variation among seasonally separated clones of Skeletonema marinoi (Bacillariophyceae) in the Gullmar Fjord, SwedenEuropean Journal of Phycology, 45:2 177-190

Svedäng H, André C, Jonsson P, Elfman M, Limburg KE. 2010. Migratory behaviour and otolith chemistry suggest fine-scale sub-population structure within a genetically homogenous Atlantic Cod populationEnvironmental Biology on Fishes, DOI 10.1007/s10641-010-9669-y

Svensson CJ, Eriksson A, Härkönen T, Harding KC. Detecting Density Dependence in Recovering Seal PopulationsAmbio (2010) 40:52-59.

Svensson O, Lissåker M, Mobley KB (2010). Offspring recognition and the influence of clutch size on nest fostering among male sand gobies, Pomatoschistus minutusBehav. Ecol. Sociobiol. Doi:10.1007/s00265-010-0947-7.

Wood HL, Spicer JI Lowe DM, Widdicombe S. Interaction of ocean acidification and temperature; the high cost of survival in the brittlestar Ophiura ophiuraMarine Biology (2010) 157: 2001-2013


Almany G [..Godhe A...] et al (2009) Permanent Genetic Resources added to Molecular Ecology Resources Database. 1 May 2009-31 July 2009. Molecular Ecology Resources, 9:1460-1466. doi:10.1111/j.1755-0998.2009.02759.x

Andersen O, Wetten OF, De Rosa MC, André C, Alinovi CC, Colafranceschi M, Brix O, Colosimo A. (2009) Haemoglobin polymorphisms affect the oxygen-binding properties in Atlantic cod populations. Proceedings of the Royal Society B-Biological Sciences, 276 (1658): 833-841. doi:10.1098/rspb.2008.1529  PubMed 

Aspengren S, Sköld HN & Wallin M. (2009). Different strategies for color changeCellular and Molecular Life Sciences 66:187-91. Invited review. doi: 10.1007/s00018-008-8541-0 

Biressi A, Zou T, Dupont S, Dahlberg C, Di Benedetto C, Bonasoro F, Thorndyke M, Candia Carnevali MD. (2009) Wound-healing and arm regeneration in two brittlestar species (Echinodermata: Ophiuroidea): comparative morphogenesis and histogenesisZoomorphology. doi:10.1007/s00435-009-0095-7

Dahlberg C, Auger H, Dupont S, Sasakura Y, Thorndyke M, Joly JS. (2009) Refining the model system of central nervous system regeneration in Ciona intestinalis. PLoS One. 4(2): e4458. doi:10.1371/journal.pone.0004458. 

Dupont S, Le Bon O, Linotte S. (2009) Selective pressure in Academic environment - Are you genetically determined to be a phD student in biology? Acta Psychiatrica Belgica. 109: 25-28.

Dupont S & Thorndyke M (2009) Ocean Acidification and its impact on the early life-history stages of marine animals. CIESM, 2008. Impacts of acidification on biological, chemical and physical systems in the Mediterranean and Black Seas. N° 36 in CIESM Workshop Monographs [F. Briand Ed.], Monaco. pp. 89-98.Download in pdf   Dupont S & Thorndyke M. (2009) Impact of CO2-driven ocean acidification on invertebrates early life-history – What we know, what we need to know and what we can doBiogeoscience. 6, 3109-3131. Discussion Paper.

Dupont S, Thorndyke W, Thorndyke M, Burke R. (2009) Neural development of the brittlestar Amphiura filiformis. DevelopmentGenes and Evolution. 219: 159-166. 

Eriksson A, Mahjani B, Mehlig B. Sequential Markov coalescent algorithms for populationmodels with demographic structureTheoretical Population Biology (2009) 76, 84.

Fenandez-Ricaud L, Dalevi D, Blomberg A, Nerman, O. (2009) Testing of Chromosomal Clumping of Gene PropertiesStatistical Applications in Genetics and Molecular Biology, 8:19

Gaggiotti O, Bekkevold D, Jørgensen H, Foll M, Carvalho G, André C, Ruzzante DE. (2009) Disentangling the effects of evolutionary, demographic, and environmental factors influencing genetic structure of natural populations: Atlantic Herring as a case studyEvolution, 63: 2939–29.

Geurden I, Jutfelt F, Sundell K. (2009) A vegetable oil feeding history affects digestibility and intestinal fatty acid uptake in juvenile rainbow trout Oncorhynchus mykissComparative Biochemistry and Physiology A, 152:552-559.

Gombault A, Warringer J, Caesar R, Godin F, Vallée B, Doudeau M, Chautard H, Blomberg A, Bénédetti H. (2009) A phenotypic study of TFS1 mutants differentially altered in the inhibition of Ira2p or CPYFEMS Yeast Research, 9:867

Havenhand JN, Schlegel P. (2009) Near-future levels of ocean acidification do not affect sperm motility and fertilization kinetics in the oyster Crassostrea gigasBiogeosciences, 6, 3009–3015.

Hillebrand H, Gamfeldt L, Jonsson PR, Matthiessen B. (2009) Consumer diversity indirectly changes prey nutrient contentMarine Ecology Progress Series, 380: 33-41

Härnström K, Karunasagar I, Godhe A. (2009) Phytoplankton species assemblages and their relationship to hydrographic factors—a study at the old port in Mangalore, coastal Arabian SeaIndian Journal of Marine Sciences, 38(2): 224-235.

Jagers P, Harding KC . (2009) Viability of small populations experiencing recurring catastrophesMathematical Population Studies, 16(3):177-198(22).

Johannesson K. (2009) Inverting the null-hypothesis of speciation: a marine snail perspectiveEvolutionary Ecology, 23 (1): 5-16.

Jonsson PRPavia H, Toth G. (2009) Formation of harmful algal blooms cannot be explained by allelopathic interactionsProceeding of National Academy of Science 106:11177-11182.

Kemppainen P, Panova M, Hollander J, Johannesson K. (2009) Complete lack of mitochondrial divergence between two species of NE Atlantic marine intertidal gastropodsJournal of Evolutionary Biology, Vol 22(10), 2000-2011.

Krantz M, Ahmadpour D, Ottosson L-G, Warringer J, Nordlander B, Blomberg A, Hohmann S, Kitano H.(2009) Robustness and fragility in the yeast High Osmolarity signal transduction pathwayMolecular Systems Biology, 5:281

Kohler A, Böcker U, Sørhus I, Warringer J, Blomberg A, Omholt SW, Martens, H. (2009) Reducing inter-replicate variation in FTIR spectrosocopy by extended multiplicative signal correction (EMSC)Applied Spectroscopy, 63:296

Liti G, Carter DM, Moses AM, Warringer J, Parts L, James SA, Davey RP, Roberts IN, Burt A, Koufopanou V, Tsai IJ, Bergman CM, Bensasson D, O'Kelly MJT, van Oudenaarden A, Barton DBH, Bailes E, Nguyen AN, Jones M, Quail MA, Goodhead A, Sims S, Smith F, Blomberg A, Durbin R, Louis EJ. Population genomics of domestic and wild yeastsNature (2009) 458: 337-341

Logg K, Bodvard K, Blomberg A, Käll, M. (2009) Investigations on light induced stress in fluorescence microscopy using nuclear localization of the transcription factor Msn2p as reporterFEMS Yeast Research, 9:875

Melzner F, Gutowska MA, Langenbuch M, Dupont S, Lucassen M, Thorndyke MC, Bleich M, Pörtner HO. (2009) Physiological basis for high CO2 tolerance in marine ectothermic animals: pre-adaptation through lifestyle and ontogeny? Biogeosciences, 6, 2313-2331.

Mertens, K.N., [..Godhe A...] et al. (2009) Lingulodinium machaerophorum process length variation in surface sedimentsMarine Micropaleontology, 70: 54-69.

Nilsson Sköld, H., Obst, M., Sköld, M. & Åkesson, B. (2009). Stem cells in asexual reproduction of marine invertebrates. Chapter 5. In Stem Cells In Marine Animals Eds: B. Rinkevich, V Matranga. Springer-Verlag, Berlin, Germany. p. 105-138. Invited review.

Nyqvist A, André C, Gullstrom M, Baden SP, Aberg P. (2009) Dynamics of Seagrass Meadows on the Swedish Skagerrak CoastAMBIO, 38 (2): 85-88

Olsson KH, Kvarnemo C, Svensson O. (2009). Relative costs of courtship behaviours in nest-building sand gobiesAnimal Behaviour 77:541-546.

Partridge C, Ahnesjö I, Kvarnemo C, Mobley KB, Berglund A, Jones AG. (2009). The effect of perceived female parasite load on postcopulatory male choice in a sex-role-reversed pipefishBehavioral Ecology and Sociobiology 63: 345-454. doi: 10.1007/s00265-008-0668-3

Pereyra RT, Bergstrom L, Kautsky L, Johannesson, K. (2009) Rapid speciation in a newly opened postglacial marine environment, the Baltic SeaBMC Evolutionary Biology, 9:70.

Ring A-K, Knutsen H, Fiani D, Hoelzel AR, André C. (2009) Development of ten microsatellite loci in the ling (Molva molva)Molecular Ecology Resources, 9:1401-1403.

Sadedin S, Hollander J, Panova M, Johannesson K, Gavrilets S. (2009) Case studies and mathematical models of ecological speciation. 3: Ecotype formation in a Swedish snailMolecular Ecology, 18, 4006-4023.

Serrão, EA, Havenhand JN (2009) Fertilization strategies In: M.Wahl (ed) Marine Hard Bottom Communities. Springer, Heidelberg. p 149-164.

Sundh H, Olsen RE, Fridell F, Koestan G, Evensen Ø, Glette J, Taranger GL, Myklebust R, Sundell K.(2009) The effect of hyperoxygenation and reduced flow in freshwater and subsequent IPN virus challenge in seawater, on the intestinal barrier integrity in Atlantic salmon (Salmo salar L.)Journal of Fish Disease. 32:687-698.

Svensson JR, Lindegarth M, Pavia H. (2009) Equal rates of disturbance cause different patterns of diversityEcology, 90(2): 496-505.

Svensson CJ, Pavia H, Aberg P. (2009) Robustness in life history of the brown seaweed Ascophyllum nodosum(Fucales, Phaeophyceae) across large scales: effects of spatially and temporally induced variability on population growthMarine Biology, 156 (6): 1139-1148.

Taylor R, Abrahamsson K, Godhe A,  Wängberg S-Å. (2009) Seasonal variability in polyunsaturated aldehyde production potential between strains of Skeletonema marinoi (Bacillariophyceae)Journal of Phycology, 45: 46-53.

Ungfors A, McKeown NJ, Shaw PW, André C. (2009) Lack of spatial genetic variation in the edible crab (Cancer pagurus) in the Kattegat-Skagerrak areaICES Journal of Marine Research, 66: 462-469.

Wilson KH. (2009) The genome sequence of the protostome Daphnia pulex encodes respective orthologues of a neurotrophin, a Trk and a p75NTR: evolution of neurotrophin signaling components and related proteins in the bilateriaBMC Evolutionary Biology, Oct 6;9:243.

Wood HL, Spicer JI & Widdicombe S. The influence of hypercapnia and the infaunal brittlestar Amphiura filiformis on sediment nutrient flux – will ocean acidification affect nutrient exchange? Biogeosciences (2009) 6: 2015-2024

Yilmaz A, [..Dupont S...] et al. (2009) Impacts of acidification on biological, chemical and physical systems in the Mediterranean and Black Seas. In Briand F (ed) N° 36 in CIESM Workshop Monographs. CIESM, Monaco. pp. 5-19.

Åberg P, Svensson CJ, Caswell H, Pavia H. (2009) Environment-specific elasticity and sensitivity analysis of the stochastic growth rateEcological Modelling 220: 605-610


Ahnesjö I, Forsgren E, Kvarnemo C. (2008). Variation in sexual selection in fishes. In: Fish Behaviour (Eds Magnhagen, C, Braithwaite, VA, Forsgren, E & BG Kapoor). Enfield, NH: Science Publishers Inc. doi:10.1201/b10757-11

Aspengren S, Hedberg D, Sköld HN & Wallin M. (2008). New insights into melanosome transport in vertebrate pigment cells. International Review of Cell and Molecular Biology, 272:245-302. Invited review.

Bergkvist J, Selander E, Pavia H. (2008) Induction of toxin production in dinoflagellates: the grazer makes a differenceOecologia doi: 10.1007/s00442-008-0981-6

Dupont S, Havenhand J, Thorndyke W, Peck L, Thorndyke MC. (2008) Near-future level of CO2-driven ocean acidification radically affects larval survival and development in the brittlestar Ophiothrix fragilisMarine Ecology Progress Series, 373: 285-294.

Godhe A, Asplund M, Härnström K, Saravanan V, Tyagi A, Karunasagar I. (2008) Quantifying diatom and dinoflagellate biomass in coastal marine sea water samples by real-time PCRApplied and Environmental Microbiology, 74(23): 7174-7182.

Havenhand JN, Buttler FR, Thorndyke MC, Williamson JE. (2008) Near-future levels of ocean acidification reduce fertilization success in a sea urchinCurrent Biology, 18 (15): R651-R652.

Holm K, Dupont S, Sköld H, Stenius A, Thorndyke M, Henroth B. (2008) Induced cell proliferation in putative haematopoietic tissues of the sea star, Asterias rubens (L.) Journal of Experimental Biology, 211: 2551-2558.

Johannesson K, Havenhand JN, Jonsson PR, Lindegarth M, Sundin A, Hollander J. (2008). Male discrimination of female mucous trails permits assortative mating in marine snail speciesEvolution, 62 (12): 3178-3184. PubMed

Lissåker M, Svensson O. (2008) Cannibalize or care? The role of perceived paternity in the sand goby, Pomatoschistus minutusBehavioral Ecology and Sociobiology, 62:1467-1475.

Mäkinen T, Panova M, Appelqvist C, Tatarenko A, Johannesson K, André C. 2008. Genetic differentiation on multiple spatial scales in an ecotype-forming marine snail with limited dispersal: Littorina saxatilisBiological Journal of the Linnean Society. 94: 31-40

Nylund GMCervin CPersson FHermansson MSteinberg PDPavia H. (2008) Seaweed defence against bacteria: a poly-brominated 2-heptanone from the red alga Bonnemaisonia hamifera inhibits bacterial colonizationMarine Ecology Progress Series, 369: 39-50.

Olsen RE, Sundell K, Ringø E, Myklebust R, Hemre G-I, Hansen T, Karlsen Ø. (2008) The acute stress response in fed and food deprived Atlantic cod, Gadus morhua L.. Aquaculture 280:232-241.

Oweson C, Sköld H, Pinsino A, Matranga V, Hernroth B. (2008). Manganese effects on the haematopoiesis ofAsterias rubensAquatic toxicology 89: 75-81

Panova M, Mäkinen T, Fokin M, André C, Johannesson K. Microsatellite cross-species amplification in the genus Littorina and detection of null alleles in Littorina saxatilisJournal of Molluscan Studies. (2008) 74: 111–117.

Roy M, Harding KC and Holt RD. (2008) Generalizing Levins metapopulation model in explicit space: models of intermediate complexityJournal of Theoretical Biology, 255(1): 152-161. doi:10.1016/j.jtbi.2008.07.022 

Selander E, Cervin G, Pavia H. (2008) The effect of nitrate and phosphate on grazer induced paralytic shellfish toxin formation in Alexandrium minutum. Limnology and Oceanography, 53:523-530

Sköld HN, Svensson A, Amundsen, T, Mayer I, Bjelvenmark J,  Forsgren E. (2008). Hormonal regulation of female nuptial coloration in a fishHormones and Behaviour 54: 549-556.

Styan CA, Kupriyanova E, Havenhand JN. (2008) Strong barriers to cross-fertilization between populations of a polychaete species are unlikely to have arisen through gametic compatibility arms-racesEvolution, 62: 3041-3055.

Sundell K, Power D. (2008) Special Issue: Functional Genomics in Sustainable Aquaculture IntroductionReviews in Fisheries Science 16:1-2.

Wood HL, Spicer JI, Widdicombe S. Ocean acidification may increase calcification - but at a costProceedings of Royal Society B. (2008) 275, 1767-1773.


Cover of publication nature plants Vol 9, Issue 8, Aug 2023
Photo: Uli Kunz, Submaris
Cover of Special Issue Evolutionary Application on Marine Evol Biology
Front cover for Philosophical transactions of the Royal Society B.
Photo: Kerstin Johannesson

Doctoral & Licentiate theses

Photo: GU


Bergström U,…[Green L,]…et al. ICES. 2022. Workshop on Stickleback and Round Goby in the Baltic Sea (WKSTARGATE). ICES Scientific Reports. 4:77. 56 pp. doi:10.17895/

Sundberg P, Axberg A, Daraghmeh N, Panova M, Obst M. (2022) Genetic methods in environmental monitoring: Early detection and monitoring of non-indigenous species based on DNA. Report 2022:4, Swedish Agency for Marine and Water Management. ISBN: 978-91-89329-32-4

Boyd PW, Collins S, Dupont S, Fabricius K, Gattuso J-P, Havenhand J, Hutchins DA, McGraw CM, Riebesell U, Vichi M, Biswas H, Ciotti A, Dillingham P, Gao K, Gehlen M, Hurd CL, Kurihawa H, Navarro J, Nilsson GE, Passow U, Portner H-O. (2019). SCOR WG149 Handbook to support the SCOR Best Practice Guide for ‘Multiple Drivers’ Marine Research. 

Wallhead PJ, Chen W, Falkenberg L, Norling M, Bellerby R, Dupont S, Fagerli C, Dale T, Hancke K & Christie H, 2018. Urchin harvesting and kelp regrowth in northern Norway under ocean acidification and warming. In: AMAP Assessment 2018: Arctic Ocean Acidification. pp. 79-90 Arctic Monitoring and Assessment Programme (AMAP), Tromsø, Norway.

BONUS-BAMBI - Management recommendations, November 2017

REPORT – Symposium ”Art of Publishing”, 2015 
Take-home-message from ”Art of Publishing” symposium: how to publish rapidly and efficiently, limit stress and deal with carrier issues, by Sylvie Tesson. 9 pp.

The Significance and Management of Natural Carbon Stores in the Open Ocean. Laffoley, D., Baxter, J. M., Thevenon, F. and Oliver, J. (editors). 2014. Full report. Gland, Switzerland: IUCN. 124 pp. Sam Dupont is one of the authors.

An Updated Synthesis of the Impacts of Ocean Acidification on Marine Biodiversity. (2014). (Eds. S. Hennige, J.M. Roberts and P. Williamson). Montreal, Secretariat of the Convention on Biological Diversity Technical Series No. 75, 99 pages. Jon Havenhand and Sam Dupont were lead authors in this report. 

Report on marine species: The response and potential adaptation of marine species to CO2 exposure associated with different potential CO2 leakage scenarios. ECO2 Deliverable, D4.2 . UNSPECIFIED. Morgan E, Hauton C, Schade H, Melzner F, Guilini K, Vanreusel A, Meyer S, Ramette A, Dupont S, Widdicombe S. (2014)

AMAP Assessment 2013: Arctic Ocean Acidification. AMAP, Oslo. 2013. Arctic Monitoring and Assessment Programme (AMAP), Oslo, Norway. viii + 99 pp.

Brander K, Havenhand J. 2012. Impacts of Climate Change, Including Acidification, on Marine Ecosystems and Fisheries. In: Reckermann M., Brander K., MacKenzie B. R. & Omstedt A. (Eds.), Climate impacts on the Baltic Sea: from science to policy, 2012, pp 129-160. Berlin Heidelberg: Springer-Verlag.

Lindberg P, Svensson O (2012). Elfiske i Västra Götalands län år 2011. Länsstyrelsen i Västra Götalands län. Löpnr 2012:26. 265 pp.

Bridging the gap between ocean acidification impacts and economic valuation. Conclusions and recommendations for decision makers. Report from the International Workshop, 16-18 November 2010, IAEA, Monaco. The Monaco Environment and Economics Group, 2011, 8 pp. Sam Dupont is one of the contributors. Fauville G, Hodin J, Dupont S, Miller P, Haws J, Thorndyke M, Epel D. Virtual Ocean Acidification Laboratory as an Efficient Educational Tool to Address Climate Change Issues. In: Leal Filho W. (Ed.) The Economic, Social and Political Elements of Climate Change, 2011, 825-836. Springer Verlag.

Lindberg P, Svensson O, Nöbelin F (2011). Fiskbestånden i Roxen och Glan. Länsstyrelsen i Östergötlands län. Löpnr 2011:15. 44 pp.

Havenhand J, Dupont S, Quinn J.  Chapter 4 Designing ocean acidification experiments to maximise inference(PDF) Riebesell U., Fabry V. J., Hansson L. & Gattuso J.-P. (Eds.), 2010. Guide to best practices for ocean acidification research and data reporting, 260 p. Luxembourg: Publications Office of the European Union.

Pörtner HO, Dupont S, Melzner F, Storch D, Thorndyke M. Chapter 10 Studies of metabolic rate and other characters across life stages (PDF). Riebesell U., Fabry V. J., Hansson L. & Gattuso J.-P. (Eds.), 2010. Guide to best practices for ocean acidification research and data reporting, 260 p. Luxembourg: Publications Office of the European Union.

Widdicombe S, Dupont S, Thorndyke M. Chapter 7 Laboratory experiments and benthic mesocosm studies(PDF) Riebesell U., Fabry V. J., Hansson L. & Gattuso J.-P. (Eds.), 2010. Guide to best practices for ocean acidification research and data reporting, 260 p. Luxembourg: Publications Office of the European Union.

Fauville G, Hodin J, Dupont S, Miller P, Haws J, Thorndyke M, Epel D. (2009) Virtual ocean acidification laboratory as an efficient educational tool to address climate change issues. Climate 2009/KLIMA 2009.

Howard W, Havenhand JN, Parker L, Raftos D, Ross P, Williamson J, Matear R. (2009) A marine climate change impacts and adaptation report card for Australia. CSIRO, Canberra, Australia. 

Prunet, P. McAndrew, B. ; Didcock, C. Sundell K. Power DM. et al. (2009) Genomic in fish and shellfish: From research to aquaculture. AQUAGENOME N°044481. Final report. pp. 52

Prunet, P. Figueras, A. Sundell, K. et al. (2009) A white paper on genomics in European Aquaculture Research. EU FP7

Andersson P, Håkansson B, Håkansson J, Sahlsten E, Havenhand J, Thorndyke M & Dupont S (2008) Marine acidification – On effects and monitoring of marine acidification in the seas surrounding Sweden. SMHI report, Oceanografi 82. 62 pages. 

Havenhand JN, Thorndyke MC, Dupont S (2008) Försurning av haven. In: Viklund (ed) Havet 2008. Naturvårdsverket. p 29-32.

Sundell K., Power DM, Prunet P and Figueras A. (2008) Integrated knowledge on functional genomics in sustainable aquaculture. AQUAFUNC N°022685. Final report. pp. 285

Svedäng H, Andre C. 2008. Observations on migratory behaviour of Atlantic cod strongly support natal homing. In: Spatial structure of cod populations: What are the implications for the assessment and management of cod stocks? A Mini-Symposium 22-23 May, 2007 The Agri-Food and Biosciences Institute, Belfast, United Kingdom. Edited by: Walter Crozier, Mike Heath, David Righton.


Photo: Fredrik Pleijel




  • Evolution - the origin and development of life
    All living things, millions of species of plants and animals as well as humans, have a common origin. Since the first sign of life 3.8 billion years ago, constant change and development have occurred, what we call evolution.
    Meet three prominent evolutionary scientists at Uppsala University: Per Ahlberg, Hans Ellegren and Lynn Kamerlin, and Kerstin Johannesson at the University of Gothenburg.
    The film was produced by the Knut and Alice Wallenberg Foundation, 2017-03-29
  • I am the Ocean - arts and sciences to move from ocean literacy to passion for the ocean, by Sam Dupont
    The outreach activities within CeCAR during 2017 and 2018 will focus on ocean acidification, marine environment and Co2 emissions. The observed changes in the ocean is a symptom of something bigger: the combination of local and global anthropogenic changes. These will have consequenses on humans and there is a need for increased ocean literacy. 


  • Sea snails & prawns on the front line of ocean acidification, Stephen Gillman. Horizon, The EU Research & Innovation Magazine. Anna-Sara Krång's research on how ocean acidification affects the immune system in Norwegian lobster, Nephrops norvegicus, is one of the highlighted projects in the article. Anna-Sara Krång is project leader for CruCSChange, an EU-funded project aimed at understanding the combined impacts of climate change on marine organisms, such as the effect of ocean acidification and pollution on crustaceans.


  • Framtidens miljöövervakning tar hjälp av DNA-analys, Liljenström S. Extrakt, aktuell forskning för ett hållbart samhälle. Formas. (2014) Anna Godhe's research and her search for a molecular tool tracing adaptation in diatoms to eutrophication through history is presented in the popular science magazine Extrakt from Formas. 
  • Så ska livet under ytan få bästa skydd, Liljenström S. Extrakt, aktuell forskning för ett hållbart samhälle. Formas. (2014)
    Per Jonsson's research on larval dispersal and the design of marine reserve networks in Sweden is presented in the popular science magazine Extrakt from Formas.


  • CeMEB in Progress – Highlights in midterm from the Linnaeus Centre for Marine Evolutionary Biology, CeMEB. A publication, aimed for a nonspecialist audience, presents research and results and gives an introduction to the CeMEB world. (2013) 26 pp.
    CeMEB in Progress
  • Goda idéer for en bättre värld. De kungliga stiftelserna. Ny manet ho mot västkustens ekosystem, s 2-3. Presentation av Lene Friis Möllers forskning.
  • Försök att återskapa Bohusläns torskbestånd, s 9. Johannesson K. Västerhavet (Kontaktgrupp Hav) (2013).
  • Sociala tanganyikaciklider – andra delen av rapporten från ISBE 2012. Svensson O (2013). Ciklidbladet 1/2013: 45.


  • Rapport från ISBE 2012 – den 14:e internationella beteendeekologikongressen. Svensson O (2012). Ciklidbladet 4/2012: 25.


  • Den bortglömda mångfalden. Johannesson K. Havsutsikt 2/2011
  • Ta fisken och miljön i samma båt. Johannesson K. Framtider (Institutet för framtidsstudier, Stockholm) (2011).
  • Sea Urchin Body Is One Big Eye. Charles Q Choi for National Geographic News, Published May 2, 2011.
  • Environment: Earth's acid test. Nature News. Published online 9 March 2011 | Nature 471, 154-156 (2011). doi:10.1038/471154a
  • Förhistoriska klimatförändringar i Malawisjön. Svensson O (2011). Ciklidbladet 2/2011: 39.


  • Bevara bjälklagsarterna - nödvändiga recept för hållbara ekosystem. Johannesson K. Biodiversa (Svenska Artdatabanken) (2010).
  • Nordic Marine Science Today - Highlights from the Nordic Marine Science Conference 2010 (pdf), Strömstad. 2010, 16 pp, The Swedish Society for Marine Sciences.
  • Inquiry-to-Insight (I2I): An International Digital Environmental Education Project 
    Géraldine Fauville, Jason Hodin, Pam Miller, Sam Dupont, David Epel, and Michael Thorndyke. Posted on September 19th, 2010 in Earthzine/ Articles, Education, Technology

    The Inquiry-to-Insight (I2I) project, a collaboration between Gothenburg University in Sweden and Stanford University in California, offers an educational program combining information and communication technologies (ICT), social networking Internet communities, and pedagogy directed at learning about and envisioning solutions to global environmental issues.
  • Guide to best practices for ocean acidification research and data reporting. 2010, 260 p. Riebesell U., Fabry V. J., Hansson L. & Gattuso J.-P. (Eds.) Luxembourg: Publications Office of the European Union.
  • Björnsson BTh. Sundell K. Boudinot P. Le Gac F. Johnston IA. Schulz R. Canario AVM. Power DM. Stefansson SO. Zanuy S. Martin S and Secombes C. 2010. The LIFECYCLE project: greater basic knowledge on fish biology will help find long-term solutions to aquaculture production bottlenecks. Aquacult Eur 35:20-22
  • Hotas Tanganyikasjöns sardinfiske av det varmare klimatet? Svensson O (2010). Ciklidbladet 3/2010: 21.
  • Rapport från en vetenskaplig konferens i Berlin om evolutionär ekologi hos fiskar. Svensson O (2010). Ciklidbladet 1/2010:41.


  • Rödslistor och ekosystemansats - en svårlöst ekvation. Johannesson K. Kapitel i antologin: Naturvård bortom 2009. (red LJ Lundgren). Kassandra, 2009. 
  • Sex hos djur, Kvarnemo, C.  In: Djuren och människan - Om den moderna biologin och dess världsbild. (Ed LJ Erkell). Studentlitteratur, Lund.2009
  •  Fina fisken: fisken och forskaren snackar färg. Nilsson Sköld H. 2009. Havsutsikt 2: 10-11
  • Virtual ocean acidification laboratory as an efficient educational tool to address climate change issues. 
    Géraldine Fauville, Jason Hodin, Sam Dupont, Pam Miller, Julie Haws, Michael Thorndyke, David Epel. Online climate conference "Climate 2009/Klima 2009"



Photo: Patrik Larsson