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Daniel Bojar
Universitetslektor
Institutionen för kemi och molekylärbiologi-
Seal milk oligosaccharides rival human milk complexity and exhibit functional dynamics during
lactation
Chunsheng Jin, Jon Lundstrøm, Carmen R. Cori, Shih Yun Guu, Alex Bennett, Mirjam Dannborg, Patrick P. Pomeroy, Malcolm W. Kennedy, Johan Bengtsson-Palme, Rachel Hevey, Kay Hooi Khoo, Daniel Bojar
Nature Communications - 2025 -
Serum N-glycosylation is altered in Nephropathic
Cystinosis
Andreea Cislaru, Radka Saldova, Alessandra Heggenstaller, Peter A. Nigrovic, Emily Harlin, Gordon Greville, Rafael De Andrade Moral, Daniel Bojar, Atif Awan, Roisin O'Flaherty
GLYCOBIOLOGY - 2025 -
Compositional data analysis enables statistical rigor in comparative
glycomics
Alex Bennett, Jon Lundstrøm, Sayantani Chatterjee, Morten Thaysen-Andersen, Daniel Bojar
NATURE COMMUNICATIONS - 2025 -
Navigating the maze of mass spectra: a machine-learning guide to identifying diagnostic ions in O-glycan
analysis
James Urban, Roman Joeres, Luc Thomes, Kristina A Thomsson, Daniel Bojar
ANALYTICAL AND BIOANALYTICAL CHEMISTRY - 2025 -
Deep learning method for the prediction of glycan structures from mass spectrometry
data
James Urban, Daniel Bojar
Nature Methods - 2024 -
Protocol for constructing glycan biosynthetic networks using
glycowork
Jon Lundstrøm, Luc Thomes, Daniel Bojar
STAR PROTOCOLS - 2024 -
Predicting glycan structure from tandem mass spectrometry via deep
learning
James Urban, Chunsheng Jin, Kristina A Thomsson, Niclas G. Karlsson, Callum M. Ives, Elisa Fadda, Daniel Bojar
NATURE METHODS - 2024 -
Syntactic sugars: crafting a regular expression framework for glycan
structures
Alex Bennett, Daniel Bojar
BIOINFORMATICS ADVANCES - 2024 -
Elucidating the glycan-binding specificity and structure of Cucumis melo agglutinin, a new R-type
lectin
Jon Lundstrøm, Emilie Gillon, Valerie Chazalet, Nicole Kerekes, Antonio Di Maio, Ten Feizi, Yan Liu, Annabelle Varrot, Daniel Bojar
BEILSTEIN JOURNAL OF ORGANIC CHEMISTRY - 2024 -
The evolving world of milk oligosaccharides: Biochemical diversity understood by computational
advances
Jon Lundstrøm, Daniel Bojar
CARBOHYDRATE RESEARCH - 2024 -
GlycoDraw: a python implementation for generating high -quality glycan
figures
Jon Lundstrøm, James Urban, Luc Thomes, Daniel Bojar
GLYCOBIOLOGY - 2023 -
Breast Milk Oligosaccharides Contain Immunomodulatory Glucuronic Acid and
LacdiNAc
Chunsheng Jin, Jon Lundstrøm, Emma Korhonen, Ana S. Luis, Daniel Bojar
MOLECULAR & CELLULAR PROTEOMICS - 2023 -
Decoding glycomics with a suite of methods for differential expression
analysis
Jon Lundstrøm, James Urban, Daniel Bojar
Cell Reports Methods - 2023 -
Mammalian milk glycomes: Connecting the dots between evolutionary conservation and biosynthetic
pathways
Luc Thomes, Viktoria Karlsson, Jon Lundstrøm, Daniel Bojar
Cell Reports - 2023 -
GlyLES: Grammar-based Parsing of Glycans from IUPAC-condensed to
SMILES
R. Joeres, Daniel Bojar, O. V. Kalinina
Journal of Cheminformatics - 2023 -
Deep learning explains the biology of branched glycans from single-cell sequencing
data
Rui Qin, Lara K. Mahal, Daniel Bojar
iScience - 2022 -
A Useful Guide to Lectin Binding: Machine-Learning Directed Annotation of 57 Unique Lectin
Specificities
Daniel Bojar, L. Meche, G. Meng, W. Eng, D. F. Smith, R. D. Cummings, L. K. Mahal
ACS Chemical Biology - 2022 -
Glycoinformatics in the Artificial Intelligence
Era
Daniel Bojar, F. Lisacek
Chemical Reviews - 2022 -
LectinOracle: A Generalizable Deep Learning Model for Lectin-Glycan Binding
Prediction
Jon Lundstrøm, Emma Korhonen, F. Lisacek, Daniel Bojar
Advanced Science - 2022 -
Structural insights into host–microbe
glycointeractions
Jon Lundstrøm, Daniel Bojar
Current Opinion in Structural Biology - 2022 -
Using graph convolutional neural networks to learn a representation for
glycans
R. Burkholz, J. Quackenbush, Daniel Bojar
Cell Reports - 2021 -
Glycowork: A Python package for glycan data science and machine
learning
Luc Thomès, R. Burkholz, Daniel Bojar
Glycobiology - 2021 -
The Role of Fucose-Containing Glycan Motifs Across Taxonomic
Kingdoms
Luc Thomés, Daniel Bojar
Frontiers in Molecular Biosciences - 2021 -
Construction of Caffeine-Inducible Gene Switches in Mammalian
Cells
Daniel Bojar
Mammalian Cell Engineering - 2021