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- Abhishek Niroula
Abhishek Niroula
Associate Senior Lecturer
Department of Medical Biochemistry and Cell biologyAbout Abhishek Niroula
Abhishek Niroula is Assistant Professor of Data-driven precision medicine and diagnostics at the Institute of Biomedicine, University of Gothenburg and a data-driven life science (DDLS) fellow in precision medicine and diagnostics. My research focuses on the mechanisms of cancer development in blood. We study clonal hematopoiesis (CH) defined by somatic genetic variants in blood cells of hematologically healthy individuals. The frequency of CH is common in the elderly population and it is associated with a higher risk of blood cancer, mortality, and several chronic diseases (e.g., cardiovascular, kidney, liver, and pulmonary diseases). We study how CH originates, evolves, and leads to diseases, including cancer. Our projects involve analysis of large scale DNA sequencing data and integration with multi-omics data.
Open positions: We are looking for bioinformatics Masters students, PhD students, and postdocs to join our team. If you are interested, please send us an email.
Selected publications
- Distinction of lymphoid and myeloid clonal hematopoiesis. Niroula A, Sekar A, Murakami MA, et al. Nat Med (2021). doi: doi.org/10.1038/s41591-021-01521-4
- Functional dissection of inherited non-coding variation influencing multiple myeloma risk. Ajore R, Niroula A, Pertesi M, et al. Nat Commun (2022). doi: doi.org/10.1038/s41467-021-27666-x
- MPRAscore: robust and non-parametric analysis of massively parallel reporter assays. Ajore R, Niroula A, Nilsson B. Bioinformatics (2019). doi: doi.org/10.1093/bioinformatics/btz591
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Clonal Hematopoiesis and Risk of New-Onset Myocarditis and
Pericarditis
Art Schuermans, Spencer Flynn, Abhishek Niroula, Md Mesbah Uddin, Peter Sinnaeve, Werner Budts, Nathalie Conrad, Benjamin L. Ebert, Peter Libby, Amy E. Lin, Brittany N. Weber, Pradeep Natarajan, Michael C. Honigberg
JAMA CARDIOLOGY - 2025 -
Germline genetic variation impacts clonal hematopoiesis landscape and progression to
malignancy
Jie Liu, Duc Tran, Liying Xue, Brian J. Wiley, Caitlyn Vlasschaert, Caroline J. Watson, Hamish A. J. Macgregor, Xiaoyu Zong, Irenaeus C. C. Chan, Indraniel Das, Md Mesbah Uddin, Abhishek Niroula, Gabriel Griffin, Benjamin L. Ebert, Taralynn Mack, Yash Pershad, Brian Sharber, Michael Berger, Ahmet Zehir, Ryan Ptashkin, Ross L. Levine, Elli Papaemmanuil, Vijai Joseph, Teng Gao, Yelena Kemel, Diana Mandelker, Konrad H. Stopsack, Paul D. P. Pharoah, Semanti Mukherjee, Li Ding, Yin Cao, Matthew J. Walter, Jamie R. Blundell, Nilanjan Chatterjee, Kenneth Offit, Lucy A. Godley, Daniel C. Link, Zsofia K. Stadler, Alexander G. Bick, Pradeep Natarajan, Kelly L. Bolton
NATURE GENETICS - 2025 -
Sex differences in<i> DNMT3A</i>-mutant clonal hematopoiesis and the effects of
estrogen
Julia Stomper, Abhishek Niroula, Roger Belizaire, Marie Mcconkey, Tagore Sanketh Bandaru, Benjamin L. Ebert
CELL REPORTS - 2025 -
Long-term longitudinal analysis of 4,187 participants reveals insights into determinants of clonal
hematopoiesis
Md Mesbah Uddin, Seyedmohammad Saadatagah, Abhishek Niroula, Bing Yu, Whitney E. Hornsby, Shriienidhie Ganesh, Kim Lannery, Art Schuermans, Michael C. Honigberg, Alexander G. Bick, Peter Libby, Benjamin L. Ebert, Christie M. Ballantyne, Pradeep Natarajan
Nature Communications - 2024 -
JAK2-mutant clonal hematopoiesis is associated with venous
thromboembolism
Rebecca L. Zon, Aswin Sekar, Katharine Clapham, Ohad Oren, Abhishek Niroula, Alexander G. Bick, Christopher J. Gibson, Gabriel Griffin, Md Mesbah Uddin, Donna Neuberg, Pradeep Natarajan, Benjamin L. Ebert
Blood - 2024 -
Clonal Hematopoiesis of Indeterminate Potential With Loss of Tet2 Enhances Risk for Atrial Fibrillation Through Nlrp3 Inflammasome
Activation
Amy Erica Lin, Aneesh C. Bapat, Ling Xiao, Abhishek Niroula, Jiangchuan Ye, Waihay J. Wong, Mridul Agrawal, Christopher J. Farady, Andreas Boettcher, Christopher B. Hergott, Marie Mcconkey, Patricio Flores-Bringas, Veronica Shkolnik, Alexander G. Bick, David Milan, Pradeep Natarajan, Peter Libby, Patrick T. Ellinor, Benjamin L. Ebert
CIRCULATION - 2024 -
Atrial Fibrillation and Clonal Hematopoiesis in TET2 and
ASXL1
Seyedmohammad Saadatagah, Mohammadreza Naderian, Mesbah Uddin, Ozan Dikilitas, Abhishek Niroula, Art Schuermans, Elizabeth Selvin, Ron C. Hoogeveen, Kunihiro Matsushita, Vijay Nambi, Bing Yu, Lin Yee Chen, Alexander G. Bick, Benjamin L. Ebert, Michael C. Honigberg, Na Li, Amil Shah, Pradeep Natarajan, Iftikhar J. Kullo, Christie M. Ballantyne
JAMA CARDIOLOGY - 2024