Daniel Jaén-Luchoro

Nationwide multicentre study of Nanopore long-read sequencing for 16S rRNA-species identification

Sofia Brunet, Anna Grankvist, Daniel Jaén-Luchoro, Maria Bergdahl, Jean-Luc Tison, Annica Wester, Karin Elfving, Jule Brandenburg, Karolina Gullsby, Christoffer Lindsten, Lars-Ola Arvidsson, Helena Larsson, Hinnerk Eilers, Anna Soderlund Strand, Mimi Lannefors, Johanna Keskitalo, Felicia Rylander, Jenny Welander, Malin Bergman Jungestrom, Miriam Georg, Rene Kaden, Ida Karlsson, Anna-Malin Linde, Sara Mernelius, Linda Berglind, Lars Feuk, Susanne Kerje, Linda Karlsson, Andreas Sjodin, Lina Guerra-Blomqvist, Frans Wallin, Anna Fagerstrom, Martin Vondracek, Paula Molling, Erika Tång Hallbäck
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES - 2025

Comparison of CTX-M encoding plasmids present during the early phase of the ESBL pandemic in western Sweden

Moa S. Wranne, Nahid Karami, K. K. Sriram, Daniel Jaén-Luchoro, Shora Yazdanshenas, Yii Lih Lin, Arpitha Kabbinale, Carl-Fredrik Flach, Fredrik Westerlund, Christina Åhrén
Scientific reports - 2024

Exophiala species in household environments and their antifungal resistance profile

Nahid Kondori, Daniel Jaén-Luchoro, Roger Karlsson, Bahman Abedzaedeh, Helena Hammarström, Bodil Jönsson
SCIENTIFIC REPORTS - 2024

Comparative Genomic Analysis of ST131 Subclade C2 of ESBL-Producing E. coli Isolates from Patients with Recurrent and Sporadic Urinary Tract Infections

Daniel Jaén-Luchoro, A. Kahnamouei, S. Yazdanshenas, Anna Lindblom, E. Samuelsson, Christina Åhrén, Nahid Karami
Microorganisms - 2023

Legionella maioricensis sp. nov., a new species isolated from the hot water distribution systems of a hospital and a shopping center during routine sampling

S. Crespi, V. Drasar, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Beatriz Pineiro-Iglesias, P. C. Lindemann, F. Aliaga-Lozano, V. Fernandez-Juarez, G. Coll-Garcia, Edward R.B. Moore, A. Bennasar-Figueras
International Journal of Systematic and Evolutionary Microbiology - 2023

Knockout of Targeted Plasmid-Borne fl-Lactamase Genes in an Extended-Spectrum-fl-Lactamase-Producing Escherichia coli Strain: Impact on Resistance and Proteomic Profile

Daniel Jaén-Luchoro, R. Karlsson, A. Busquets, Beatriz Piñeiro-Iglesias, Nahid Karami, N. P. Marathe, Edward R.B. Moore
Microbiology Spectrum - 2023

Comparative genomics of Stutzerimonas balearica (Pseudomonas balearica): diversity, habitats, and biodegradation of aromatic compounds

Francisco Salva-Serra, D. Perez-Pantoja, R. A. Donoso, Daniel Jaén-Luchoro, V. Fernandez-Juarez, Hedvig Engström-Jakobsson, Edward R.B. Moore, J. Lalucat, A. Bennasar-Figueras
Frontiers in Microbiology - 2023

Responses of carbapenemase-producing and non-producing carbapenem-resistant Pseudomonas aeruginosa strains to meropenem revealed by quantitative tandem mass spectrometry proteomics

Francisco Salvà-Serra, Daniel Jaén-Luchoro, N. P. Marathe, Ingegerd Adlerberth, Edward R.B. Moore, Roger Karlsson
Frontiers in Microbiology - 2023

Genomic characterization and assessment of pathogenic potential of Legionella spp. isolates from environmental monitoring

E. Svetlicic, Daniel Jaén-Luchoro, R. S. Klobucar, C. Jers, S. Kazazic, D. Franjevic, G. Klobucar, B. G. Shelton, I. Mijakovic
Frontiers in Microbiology - 2023

Corynebacterium genitalium sp. nov., nom. rev. and Corynebacterium pseudogenitalium sp. nov., nom. rev., two old species of the genus Corynebacterium described from clinical and environmental samples

Daniel Jaén-Luchoro, S. Al-Shaer, Beatriz Piñeiro-Iglesias, Lucia Gonzales-Siles, Sofia Cardew, Susanne Jensie-Markopolous, Maria Ohlén, E. Inganas, M. Neumann-Schaal, J. Wolf, Edward R.B. Moore
Research in Microbiology - 2023

Everything Is Everywhere: Physiological Responses of the Mediterranean Sea and Eastern Pacific Ocean Epiphyte Cobetia Sp. to Varying Nutrient Concentration

V. Fernández-Juárez, Daniel Jaén-Luchoro, J. Brito-Echeverría, N. S. R. Agawin, A. Bennasar-Figueras, P. Echeveste
Microbial Ecology - 2022

Identification of Antibiotic Resistance Proteins via MiCId's Augmented Workflow. A Mass Spectrometry-Based Proteomics Approach

G. Alves, A. Ogurtsov, Roger Karlsson, Daniel Jaén-Luchoro, Beatriz Piñeiro-Iglesias, Francisco Salvà-Serra, Björn Andersson, Edward R.B. Moore, Y. K. Yu
Journal of the American Society for Mass Spectrometry - 2022

Mass Spectrometry Proteotyping-Based Detection and Identification of Staphylococcus aureus, Escherichia coli, and Candida albicans in Blood

Nahid Kondori, A. Kurtovic, B. Pineiro-Iglesias, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Björn Andersson, G. Alves, A. Ogurtsov, Annika Thorsell, Johannes Fuchs, T. Tunovic, N. Kamenska, A. Karlsson, Y. K. Yu, Edward R.B. Moore, Roger Karlsson
Frontiers in Cellular and Infection Microbiology - 2021

Analyses of Virulence Genes of Clavibacter michiganensis subsp. michiganensis Strains Reveal Heterogeneity and Deletions That Correlate with Pathogenicity

M. Valenzuela, M. Gonzalez, A. Velasquez, F. Dorta, I. Montenegro, X. Besoain, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Edward R.B. Moore, M. Seeger
Microorganisms - 2021

Comparative Genomics of Clinical Isolates of the Emerging Tick-Borne Pathogen Neoehrlichia mikurensis

A. Grankvist, Daniel Jaén-Luchoro, Linda Wass, Per Sikora, Christine Wennerås
Microorganisms - 2021

Identity of bla(CTX-M) Carrying Plasmids in Sequential ESBL-E. coli Isolates from Patients with Recurrent Urinary Tract Infections

Nahid Karami, S. Kk, Shora Yazdanshenas, Y. L. Lin, Daniel Jaén-Luchoro, E. Ekedahl, S. Parameshwaran, Anna Lindblom, Christina Åhrén, F. Westerlund
Microorganisms - 2021

Comparative Genomics of Pathogenic Clavibacter michiganensis subsp. michiganensis Strains from Chile Reveals Potential Virulence Features for Tomato Plants.

Valentina Méndez, Miryam Valenzuela, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Ximena Besoain, Edward R.B. Moore, Michael Seeger
Microorganisms - 2020

Corynebacterium sanguinis sp. nov., a clinical and environmental associated corynebacterium.

Daniel Jaén-Luchoro, Lucia Gonzales-Siles, Roger Karlsson, Liselott Svensson-Stadler, Kent Molin, Sofia Cardew, Susanne Jensie-Markopolous, Maria Ohlén, Elisabeth Inganäs, Susann Skovbjerg, Brian J Tindall, Edward R.B. Moore
Systematic and applied microbiology - 2020

Staphylococcus borealis sp. nov., isolated from human skin and blood

M. Pain, R. Wolden, Daniel Jaén-Luchoro, Francisco Salvà-Serra, Beatriz Piñeiro-Iglesias, R. Karlsson, C. Klingenberg, J. P. Cavanagh
International journal of systematic and evolutionary microbiology - 2020

Complete genome sequences of Streptococcus pyogenes type strain reveal 100%-match between PacBio-solo and Illumina-Oxford Nanopore hybrid assemblies

Francisco Salvà-Serra, Daniel Jaén-Luchoro, Hedvig E Jakobsson, Lucia Gonzales-Siles, Roger Karlsson, A. Busquets, M. Gomila, A. Bennasar-Figueras, J. E. Russell, M. A. Fazal, S. Alexander, Edward R.B. Moore
Scientific Reports - 2020

A Pangenome Approach for Discerning Species-Unique Gene Markers for Identifications of Streptococcus pneumoniae and Streptococcus pseudopneumoniae

Lucia Gonzales-Siles, Roger Karlsson, Patrik Schmidt, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Susann Skovbjerg, Edward R.B. Moore, M. Gomila
Frontiers in Cellular and Infection Microbiology - 2020

Discovery of Species-unique Peptide Biomarkers of Bacterial Pathogens by Tandem Mass Spectrometry-based Proteotyping

Roger Karlsson, Annika Thorsell, M. Gomila, Francisco Salvà-Serra, Hedvig E Jakobsson, Lucia Gonzales-Siles, Daniel Jaén-Luchoro, Susann Skovbjerg, Johannes Fuchs, A. Karlsson, F. Boulund, Anna Johnning, Erik Kristiansson, Edward R.B. Moore
Molecular & Cellular Proteomics - 2020

Genomic and Proteomic Characterization of the Extended-Spectrum beta-Lactamase (ESBL)-Producing Escherichia coli Strain CCUG 73778: A Virulent, Nosocomial Outbreak Strain

Daniel Jaén-Luchoro, A. Busquets, Roger Karlsson, Francisco Salvà-Serra, Christina Åhrén, Nahid Karami, Edward R.B. Moore
Microorganisms - 2020

Beware of false “type strain” genome sequences

Francisco Salvà-Serra, Daniel Jaén-Luchoro, Roger Karlsson, A. Bennasar-Figueras, Hedvig E Jakobsson, Edward R.B. Moore
Microbiology Resource Announcements - 2019

Complete Genome Sequence of Hydrocarbon-Degrading Halotolerant Acinetobacter radioresistens DD78, Isolated from the Aconcagua River Mouth in Central Chile

C. C. Macaya, V. Mendez, R. E. Duran, P. Aguila-Torres, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Edward R.B. Moore, M. Seeger
Microbiology Resource Announcements - 2019

Complete Genome Sequence of the Marine Hydrocarbon Degrader Alcaligenes aquatilis QD168, Isolated from Crude Oil-Polluted Sediment of Quintero Bay, Central Chile

R. E. Duran, B. Barra-Sanhueza, Francisco Salvà-Serra, V. Mendez, Daniel Jaén-Luchoro, Edward R.B. Moore, M. Seeger
Microbiology Resource Announcements - 2019

High throughput screening of growth on sub-MIC antibiotics and conjugation efficiency of a collection of natural E. coli isolates

Martin Palm, Fabrice Graf, Owens Uwangue, Marta Tous Mohedano, Daniel Jaén-Luchoro, Edward R.B. Moore, Jonas Warringer, Anne Farewell
International Symposium of the International Society for Plasmid Biology and other Mobile Genetic Elements - 2018

Complete genome sequence of the hydrocarbon-degrading strain achromobacter sp. B7, isolated during petroleum hydrocarbon bioremediation in the valparaiso region, Chile

V. Méndez, L. Hernández, Francisco Salvà-Serra, Daniel Jaén-Luchoro, R. E. Durán, B. Barra, Beatriz Piñeiro-Iglesias, Edward R.B. Moore, M. Seeger
Microbiology Resource Announcements - 2018

Complete genome sequence of the marine Rhodococcus sp H-CA8f isolated from Comau fjord in Northern Patagonia, Chile

A. Undabarrena, Francisco Salvà-Serra, Daniel Jaén-Luchoro, E. Castro-Nallar, K. N. Mendez, R. Valencia, J. A. Ugalde, Edward R.B. Moore, M. Seeger, B. Camara
Marine Genomics - 2018

Proteotyping bacteria: Characterization, differentiation and identification of pneumococcus and other species within the Mitis Group of the genus Streptococcus by tandem mass spectrometry proteomics

Roger Karlsson, Lucia Gonzales-Siles, M. Gomila, A. Busquets, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Hedvig E Jakobsson, A. Karlsson, Fredrik Boulund, Erik Kristiansson, Edward R.B. Moore
Plos One - 2018

Genome sequences of two naphthalene-degrading strains of Pseudomonas balearica, isolated from polluted marine sediment and from an oil refinery site

Francisco Salvà-Serra, Hedvig E Jakobsson, A. Busquets, M. Gomila, Daniel Jaén-Luchoro, C. Seguí, F. Aliaga-Lozano, E. García-Valdés, J. Lalucat, Edward R.B. Moore, A. Bennasar-Figueras
Genome Announcements - 2017

First insights into a type II toxin-antitoxin system from the clinical isolate Mycobacterium sp MHSD3, similar to epsilon/zeta systems

Daniel Jaén-Luchoro, Francisco Aliaga-Lozano, R. M. Gomila, M. Gomila, Francisco Salvà-Serra, J. Lalucat, A. Bennasar-Figueras
Plos One - 2017

Proteotyping for Rapid Identifications of Clinically-Relevant Infectious Bacteria

Francisco Salvà-Serra, Hedvig E Jakobsson, Lucia Gonzales-Siles, Roger Karlsson, Fredrik Boulund, Daniel Jaén-Luchoro, A Bennasar-Figueras, Erik Kristiansson, Edward R.B. Moore
Programme of the XXXV ECCO Meeting 2016 - 2016

Complete Genome Sequence of Pseudomonas balearica DSM 6083T.

Antoni Bennasar-Figueras, Francisco Salvà-Serra, Daniel Jaén-Luchoro, Carolina Seguí, Francisco Aliaga, Antonio Busquets, Margarita Gomila, Edward R.B. Moore, Jorge Lalucat
Genome Announcements - 2016

Complete Genome Sequence of the Mycobacterium immunogenum Type Strain CCUG 47286.

Daniel Jaén-Luchoro, Carolina Seguí, Francisco Aliaga-Lozano, Francisco Salvà-Serra, Antonio Busquets, Margarita Gomila, Antonio Ramírez, Mikel Ruiz, Edward R.B. Moore, Jorge Lalucat, Antoni Bennasar-Figueras
Genome Announcements - 2016

Daniel Jaén-Luchoro

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