Sanna Abrahamsson
Om Sanna Abrahamsson
Current Position at GU
I'm a bioinformatician at the Bioinformatics and Data Centre at the Sahlgrenska Academy, where we provide:
- High throughput techniques for biomedical, clinical and pre-clinical research.
- Wide range of statistical and bioinformatics support and training.
- Cluster hardware and software infrastructure development
Education and previous experience
Master in systems biology and functional genomics, Gothenburg University.
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Transplantation of gut microbiota from old mice into young healthy mice reduces lean mass but not bone
mass
Lina Lawenius, C. Cowardin, Louise Grahnemo, Julia Scheffler, Karin Horkeby, Cecilia Engdahl, Jianyao Wu, Liesbeth Vandenput, A. Koskela, J. Tukkanen, E. Coward, K. Hveem, A. Langhammer, Sanna Abrahamsson, J. I. Gordon, Klara Sjögren, Claes Ohlsson
Gut Microbes - 2023 -
Transcriptomics unravels molecular changes associated with cilia and COVID-19 in chronic rhinosinusitis with nasal
polyps
Åsa Torinsson Naluai, Malin Östensson, Philippa Fowler, Sanna Abrahamsson, Björn Andersson, Stina Lassesson, Frida Jacobsson, M. Oscarsson, A. Bohman, Ali M Harandi, M. Bende
Scientific Reports - 2023 -
Enhanced mitochondrial G-quadruplex formation impedes replication fork progression leading to mtDNA loss in human
cells.
Mara Doimo, Namrata Chaudhari, Sanna Abrahamsson, Valentin L'Hôte, Tran V H Nguyen, Andreas Berner, Mama Ndi, Alva Abrahamsson, Rabindra Nath Das, Koit Aasumets, Steffi Goffart, Jaakko L O Pohjoismäki, Marcela Davila Lopez, Erik Chorell, Sjoerd Wanrooij
Nucleic acids research - 2023 -
Cross-sectional associations between the gut microbe Ruminococcus gnavus and features of the metabolic
syndrome.
Louise Grahnemo, Maria Nethander, Eivind Coward, Maiken Elvestad Gabrielsen, Satya Sree, Jean-Marc Billod, Lars Engstrand, Sanna Abrahamsson, Arnulf Langhammer, Kristian Hveem, Claes Ohlsson
The Lancet. Diabetes & endocrinology - 2022 -
Optimization of cerebrospinal fluid microbial DNA metagenomic sequencing
diagnostics
Josefin Olausson, S. Brunet, Diana Vracar, Yarong Tian, Sanna Abrahamsson, Sri Harsha Meghadri, P. Sikora, M. L. Karlberg, Hedvig E Jakobsson, Ka-Wei Tang
Scientific Reports - 2022 -
Dietary restriction and medical therapy drive PPARα-regulated improvements in early diabetic kidney disease in male
rats
William P. Martin, Meera Nair, Yeong H.D. Chuah, Daniel Malmodin, Anders Pedersen, Sanna Abrahamsson, Michaela Hutter, Mahmoud Abdelaal, Jessie A. Elliott, Naomi Fearon, Hans Eckhardt, Catherine Godson, Eoin P. Brennan, Lars Fändriks, Carel W. le Roux, Neil G. Docherty
Clinical science (London, England : 1979) - 2022 -
Microbial and human transcriptome in vaginal fluid at midgestation: Association with spontaneous preterm
delivery.
Tove Wikström, Sanna Abrahamsson, Johan Bengtsson-Palme, C. Joakim Ek, Pihla Kuusela, Elham Rekabdar, Peter Lindgren, Ulla-Britt Wennerholm, Bo Jacobsson, Lil Valentin, Henrik Hagberg
Clinical and translational medicine - 2022 -
Medications Activating Tubular Fatty Acid Oxidation Enhance the Protective Effects of Roux-en-Y Gastric Bypass Surgery in a Rat Model of Early Diabetic Kidney
Disease
W. P. Martin, Y. H. D. Chuah, M. Abdelaal, Anders Pedersen, Daniel Malmodin, Sanna Abrahamsson, M. Hutter, C. Godson, E. P. Brennan, Lars Fändriks, C. W. le Roux, N. G. Docherty
Frontiers in Endocrinology - 2022 -
PΨFinder: a practical tool for the identification and visualization of novel pseudogenes in DNA sequencing
data
Sanna Abrahamsson, Frida Eiengård, Anna Rohlin, Marcela Dávila López
BMC Bioinformatics - 2022 -
A primary nasopharyngeal three-dimensional air-liquid interface cell culture model of the pseudostratified epithelium reveals differential donor- and cell type-specific susceptibility to Epstein-Barr virus
infection
P. Ziegler, Yarong Tian, Y. L. Bai, Sanna Abrahamsson, Alan Bäckerholm, A. S. Reznik, A. Green, J. A. Moore, S. E. Lee, M. M. Myerburg, H. J. Park, Ka-Wei Tang, K. H. Y. Shair
Plos Pathogens - 2021 -
Comparison of online learning designs during the COVID-19 pandemic within bioinformatics courses in higher
education
Sanna Abrahamsson, Marcela Davila Lopez
Bioinformatics - 2021 -
Deep sequencing of liver explant transcriptomes reveals extensive expression from integrated hepatitis B virus
DNA
Johan Ringlander, Catarina Skoglund, Kasthuri Prakash, Maria Andersson, Simon B. Larsson, Ka-Wei Tang, Gustaf E Rydell, Sanna Abrahamsson, Maria Castedal, Helene Norder, Kristoffer Hellstrand, Magnus Lindh
Journal of Viral Hepatitis - 2020 -
RNA Sequencing of Hepatobiliary Cancer Cell Lines: Data and Applications to Mutational and Transcriptomic
Profiling.
D. Scherer, Marcela Davila Lopez, B. Goeppert, Sanna Abrahamsson, R. González Silos, I. Nova, K. Marcelain, J.C. Roa, D. Ibberson, S.U. Umu, T. Ballestad Rounge, S. Roessler, J. Lorenzo Bermejo
Cancers - 2020