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Xuefeng Zhu
Researcher
Department of Medical Biochemistry and Cell-
Visualization of mtDNA Using
FISH
Xie Xie, Xuefeng Zhu
Methods in molecular biology (Clifton, N.J.) - 2023 -
Lsm7 phase-separated condensates trigger stress granule
formation
Michelle Lindström, Lihua Chen, Shan Jiang, Dan Zhang, Yuan Gao, J. Zheng, Xinxin Hao, Xiaoxue Yang, Arpitha Kabbinale, Johannes Thoma, Lisa Metzger, D. Y. Zhang, Xuefeng Zhu, H. S. Liu, Claes M Gustafsson, Björn Marcus Burmann, J. Winderickx, Per Sunnerhagen, Beidong Liu
Nature Communications - 2022 -
Article Non-coding 7S RNA inhibits transcription via mitochondrial RNA polymerase
dimerization
Xuefeng Zhu, Xie Xie, H. Das, Benedict Tan, Yonghong Shi, Ali Al-Behadili, Bradley Peter, E. Motori, Sebastian Valenzuela, Viktor Posse, Claes M Gustafsson, B. M. Hallberg, Maria Falkenberg
Cell - 2022 -
The human mitochondrial genome contains a second light strand
promoter
Benedict Tan, C. D. Mutti, Yonghong Shi, Xie Xie, Xuefeng Zhu, P. Silva-Pinheiro, K. E. Menger, Hector Diaz-Maldonado, W. Wei, T. J. Nicholls, P. F. Chinnery, M. Minczuk, Maria Falkenberg, Claes M Gustafsson
Molecular Cell - 2022 -
The mitochondrial single-stranded DNA binding protein is essential for initiation of mtDNA
replication
M. Jiang, Xie Xie, Xuefeng Zhu, S. Jiang, D. Milenkovic, J. Misic, Yonghong Shi, N. Tandukar, X. Li, I. Atanassov, Louise Jenninger, Emily Hoberg, S. Albarran-Gutierrez, Zsolt Szilagyi, Bertil Macao, S. J. Siira, V. Carelli, J. D. Griffith, Claes M Gustafsson, T. J. Nicholls, A. Filipovska, N. G. Larsson, Maria Falkenberg
Science Advances - 2021 -
Yeast mismatch repair components are required for stable inheritance of gene
silencing
Qian Liu, Xuefeng Zhu, Michelle Lindström, Yonghong Shi, Ju Zheng, Xinxin Hao, Claes M Gustafsson, Beidong Liu
Plos Genetics - 2020 -
Overexpression of Rac GTPase Activating Protein 1 Contributes to Proliferation of Cancer Cells by Reducing Hippo Signaling to Promote
Cytokinesis
X. M. Yang, X. Y. Cao, P. He, J. Li, M. X. Feng, Y. L. Zhang, X. L. Zhang, Y. H. Wang, Q. Yang, L. Zhu, H. Z. Nie, S. H. Jiang, G. A. Tian, X. X. Zhang, Q. Liu, J. G. Ji, Xuefeng Zhu, Q. Xia, Z. G. Zhang
Gastroenterology - 2018 -
A genome-wide imaging-based screening to identify genes involved in synphilin-1 inclusion formation in Saccharomyces
cerevisiae
Lin-Ling Zhao, Q. Yang, J. Zheng, Xuefeng Zhu, X. X. Hao, J. Song, T. Lebacq, V. Franssens, J. Winderickx, Thomas Nyström, B. D. Liu
Scientific Reports - 2016 -
Mitochondrial transcription termination factor 1 directs polar replication fork
pausing
Yonghong Shi, Viktor Posse, Xuefeng Zhu, A. K. Hyvarinen, H. T. Jacobs, Maria Falkenberg, Claes M Gustafsson
Nucleic Acids Research - 2016 -
Staphylokinase controls Staphylococcus aureus biofilm formation and detachment through host plasminogen
activation.
Jakub Kwiecinski, Marijke Peetermans, Laurens Liesenborghs, Manli Na, Halla Björnsdottir, Xuefeng Zhu, Gunnar Jacobsson, Bengt R Johansson, Joan A Geoghegan, Timothy J Foster, Elisabet Josefsson, Johan Bylund, Peter Verhamme, Tao Jin
The Journal of infectious diseases - 2016 -
Loss of the Mediator subunit Med20 affects transcription of tRNA and other non-coding RNA genes in fission
yeast
Jonas O P Carlsten, Xuefeng Zhu, Marcela Davila Lopez, Tore Samuelsson, Claes M Gustafsson
Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms - 2016 -
Mediator tail subunits can form amyloid-like aggregates in vivo and affect stress response in
yeast
Xuefeng Zhu, Lihua Chen, Jonas O P Carlsten, Qian Liu, Junsheng Yang, Beidong Liu, Claes M Gustafsson
Nucleic Acids Research - 2015 -
The exonuclease activity of DNA polymerase gamma is required for ligation during mitochondrial DNA
replication
Bertil Macao, Jay (Jennifer) Uhler, Triinu Siibak, Xuefeng Zhu, Yonghong Shi, Wenwen Sheng, Monica Olsson, J. B. Stewart, Claes M Gustafsson, Maria Falkenberg
Nature Communications - 2015 -
Antibiotic-killed Staphylococcus aureus induces destructive arthritis in
mice.
Abukar Ali, Xuefeng Zhu, Jakub Kwiecinski, Inger Gjertsson, Catharina Lindholm, Yoichiro Iwakura, Xiaoyang Wang, Nils Y Lycke, Elisabet Josefsson, Rille Pullerits, Tao Jin
Arthritis & rheumatology (Hoboken, N.J.) - 2015 -
In Vivo Occupancy of Mitochondrial Single-Stranded DNA Binding Protein Supports the Strand Displacement Mode of DNA
Replication
Javier Miralles Fusté, Yonghong Shi, Sjoerd Wanrooij, Xuefeng Zhu, Elisabeth Jemt, Örjan Persson, N. Sabouri, Claes M Gustafsson, Maria Falkenberg
Plos Genetics - 2014 -
Concentrations and health risks of lead, cadmium, arsenic, and mercury in rice and edible mushrooms in
China
Y. Fang, X. Sun, W. Yang, N. Ma, Z. Xin, J. Fu, X. Liu, M. Liu, A. M. Mariga, Xuefeng Zhu, Q. Hu
Food Chemistry - 2014 -
Essential Genetic Interactors of SIR2 Required for Spatial Sequestration and Asymmetrical Inheritance of Protein
Aggregates
J. Song, Q. Yang, Junsheng Yang, Lisa C Larsson, Xinxin Hao, Xuefeng Zhu, Sandra Malmgren Hill, Marija Cvijovic, Julia Fernandez-Rodriguez, Julie Grantham, Claes M Gustafsson, Beidong Liu, Thomas Nyström
PLoS Genetics - 2014 -
The multitalented Mediator
complex
Jonas O P Carlsten, Xuefeng Zhu, Claes M Gustafsson
Trends in Biochemical Sciences - 2013 -
Staphylokinase promotes the establishment of Staphylococcus aureus skin infections while decreasing disease
severity.
Jakub Kwiecinski, Gunnar Jacobsson, Maria Karlsson, Xuefeng Zhu, Wanzhong Wang, Tomas Bremell, Elisabet Josefsson, Tao Jin
The Journal of infectious diseases - 2013 -
Mediator Promotes CENP-A Incorporation at Fission Yeast
Centromeres
Jonas O P Carlsten, Zsolt Szilagyi, Beidong Liu, Marcela Davila Lopez, Erzsebet Szaszi, I. Djupedal, Thomas Nyström, K. Ekwall, Claes M Gustafsson, Xuefeng Zhu
Molecular and Cellular Biology - 2012 -
Histone modifications influence mediator interactions with
chromatin.
Xuefeng Zhu, Yongqiang Zhang, Gudrun Bjornsdottir, Zhongle Liu, Amy Quan, Michael Costanzo, Marcela Davila Lopez, Jakub Orzechowski Westholm, Hans Ronne, Charles Boone, Claes M Gustafsson, Lawrence Myers
Nucleic acids research - 2011 -
Mediator influences telomeric silencing and cellular life
span.
Xuefeng Zhu, Beidong Liu, Jonas O P Carlsten, Jenny Beve, Thomas Nyström, Lawrence Myers, Claes M Gustafsson
Molecular and cellular biology - 2011 -
A Chromatin-remodeling Protein Is a Component of Fission Yeast
Mediator
Olga Khorosjutina, Paulina Wanrooij, Julian Walfridsson, Zsolt Szilagyi, Xuefeng Zhu, Vera Baraznenok, Karl Ekwall, Claes M Gustafsson
JOURNAL OF BIOLOGICAL CHEMISTRY - 2010 -
Distinct differences in chromatin structure at subtelomeric X and Y' elements in budding
yeast.
Xuefeng Zhu, Claes M Gustafsson
PloS one - 2009 -
Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding
regions.
Xuefeng Zhu, Marianna Wirén, Indranil Sinha, Nina N Rasmussen, Tomas Linder, Steen Holmberg, Karl Ekwall, Claes M Gustafsson
Molecular cell - 2006 -
The classical srb4-138 mutant allele causes dissociation of yeast
Mediator.
Tomas Linder, Xuefeng Zhu, Vera Baraznenok, Claes M Gustafsson
Biochemical and biophysical research communications - 2006