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Genetic Variant on Chromosome 12p13 Does Not Show Association to Ischemic Stroke in 3 Swedish Case-Control Studies

Journal article
Authors Sandra Olsson
O Melander
Katarina Jood
JG Smith
H Lovkvist
Magnus Sjögren
G Engstrom
B Norrving
A Lindgren
Christina Jern
Published in STROKE
Volume 42
Issue 1
Pages 214-216
ISSN 0039-2499
Publication year 2011
Published at Institute of Neuroscience and Physiology, Department of Clinical Neuroscience and Rehabilitation
Pages 214-216
Language en
Links dx.doi.org/10.1161/STROKEAHA.110.59...
https://gup.ub.gu.se/file/86208
Keywords stroke, single-nucleotide polymorphism, genetic association studies
Subject categories Neurosciences

Abstract

Background and Purpose: In a genome-wide association study and subsequent case-control studies, the single-nucleotide polymorphism rs12425791 on chromosome 12p13 was reported to be associated with ischemic stroke, but this could not be validated in a recent well-powered study. We therefore investigated whether an association between ischemic stroke and rs12425791 could be detected in 3 different case-control studies from the southwest of Sweden. Methods: We examined 3606 patients with ischemic stroke and 2528 controls from 3 independent case-controls studies. Results: No significant association between ischemic stroke and the single-nucleotide polymorphism rs12425791 was detected in any of the 3 case-control samples or in the samples combined. The odds ratio for ischemic stroke for the minor allele in the combined sample was 1.02 (95% CI, 0.93 to 1.13). Conclusions: The single-nucleotide polymorphism rs12425791 does not confer a substantial risk for ischemic stroke in our population. Our results support a recent large study including other European populations.

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