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EVpedia: A Community Web Portal for Extracellular Vesicles Research

Journal article
Authors Dae-Kyum Kim
Jaewook Lee
Sae Rom Kim
Dong-Sic Choi
Yae Jin Yoon
Ji Hyun Kim
Gyeongyun Go
Dinh Nhung
Kahye Hong
Su Chul Jang
Si-Hyun Kim
Kyong-Su Park
Oh Youn Kim
Hyun Taek Park
Ji Hye Seo
Elena Aikawa
Monika Baj-Krzyworzeka
Bas W. M. van Balkom
Mattias Belting
Lionel Blanc
Vincent Bond
Antonella Bongiovanni
Francesc E. Borràs
Luc Buée
Edit I. Buzás
Lesley Cheng
Aled Clayton
Emanuele Cocucci
Charles S. Dela Cruz
Dominic M. Desiderio
Dolores Di Vizio
Karin Ekström
Juan M. Falcon-Perez
Chris Gardiner
Bernd Giebel
David W. Greening
Julia Christina Gross
Dwijendra Gupta
An Hendrix
Andrew F. Hill
Michelle M. Hill
Esther Nolte-'t Hoen
Do Won Hwang
Jameel Inal
Medicharla V. Jagannadham
Muthuvel Jayachandran
Young-Koo Jee
Malene Jørgensen
Kwang Pyo Kim
Yoon-Keun Kim
Thomas Kislinger
Cecilia Lässer
Dong Soo Lee
Hakmo Lee
Johannes van Leeuwen
Thomas Lener
Ming-Lin Liu
Jan Lötvall
Antonio Marcilla
Suresh Mathivanan
Andreas Möller
Jess Morhayim
François Mullier
Irina Nazarenko
Rienk Nieuwland
Diana N. Nunes
Ken Pang
Jaesung Park
Tushar Patel
Gabriella Pocsfalvi
Hernando del Portillo
Ulrich Putz
Marcel I. Ramirez
Marcio L. Rodrigues
Tae-Young Roh
Felix Royo
Susmita Sahoo
Raymond Schiffelers
Shivani Sharma
Pia Siljander
Richard J. Simpson
Carolina Soekmadji
Philip Stahl
Allan Stensballe
Ewa Stępień
Hidetoshi Tahara
Arne Trummer
Hadi Valadi
Laura J. Vella
Sun Nyunt Wai
Kenneth Witwer
María Yáñez-Mó
Hyewon Youn
Reinhard Zeidler
Yong Song Gho
Published in Bioinformatics
Volume 31
Issue 6
Pages 933-939
ISSN 1367-4803
Publication year 2015
Published at Krefting Research Centre
Institute of Medicine, Department of Rheumatology and Inflammation Research
Institute of Clinical Sciences, Department of Biomaterials
Pages 933-939
Language en
Links dx.doi.org/10.1093/bioinformatics/b...
Keywords Extracellular Vesicles, Exosomes
Subject categories Mathematics, Cell and Molecular Biology

Abstract

Motivation: Extracellular vesicles (EVs) are spherical bilayered proteolipids, harboring various bioactive molecules. Due to the complexity of the vesicular nomenclatures and components, online searches for EV-related publications and vesicular components are currently challenging. Results: We present an improved version of EVpedia, a public database for EVs research. This community web portal contains a database of publications and vesicular components, identification of orthologous vesicular components, bioinformatic tools and a personalized function. EVpedia includes 6879 publications, 172 080 vesicular components from 263 high-throughput datasets, and has been accessed more than 65 000 times from more than 750 cities. In addition, about 350 members from 73 international research groups have participated in developing EVpedia. This free web-based database might serve as a useful resource to stimulate the emerging field of EV research.

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